Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Gm45433-201ENSMUST00000209386 247 ntBASIC12.03□□□□□ -0.48
Msx3P70354 Gm7940-201ENSMUST00000218195 769 ntBASIC12.03□□□□□ -0.48
Msx3P70354 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msx3P70354 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msx3P70354 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msx3P70354 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msx3P70354 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msx3P70354 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.03□□□□□ -0.48
Msx3P70354 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Msx3P70354 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msx3P70354 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msx3P70354 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msx3P70354 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Msx3P70354 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Msx3P70354 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Msx3P70354 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.02□□□□□ -0.48
Msx3P70354 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Msx3P70354 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Msx3P70354 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Msx3P70354 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Msx3P70354 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.02□□□□□ -0.48
Msx3P70354 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Msx3P70354 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Msx3P70354 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.02□□□□□ -0.48
Msx3P70354 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.02□□□□□ -0.49
Msx3P70354 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msx3P70354 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Msx3P70354 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msx3P70354 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Msx3P70354 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Msx3P70354 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Msx3P70354 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msx3P70354 Gm15207-201ENSMUST00000119259 442 ntBASIC12.02□□□□□ -0.49
Msx3P70354 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Msx3P70354 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.02□□□□□ -0.49
Msx3P70354 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Msx3P70354 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Msx3P70354 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.02□□□□□ -0.49
Msx3P70354 Gm28071-201ENSMUST00000190355 478 ntBASIC12.02□□□□□ -0.49
Msx3P70354 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.02□□□□□ -0.49
Msx3P70354 Gm5982-201ENSMUST00000196234 512 ntBASIC12.02□□□□□ -0.49
Msx3P70354 Gm43966-201ENSMUST00000203301 612 ntBASIC12.02□□□□□ -0.49
Msx3P70354 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msx3P70354 Gm6082-201ENSMUST00000215204 454 ntBASIC12.02□□□□□ -0.49
Msx3P70354 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.02□□□□□ -0.49
Msx3P70354 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.02□□□□□ -0.49
Msx3P70354 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msx3P70354 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msx3P70354 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msx3P70354 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msx3P70354 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msx3P70354 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Msx3P70354 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msx3P70354 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Msx3P70354 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msx3P70354 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Msx3P70354 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msx3P70354 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msx3P70354 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msx3P70354 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Msx3P70354 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Msx3P70354 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.01□□□□□ -0.49
Msx3P70354 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.01□□□□□ -0.49
Msx3P70354 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Msx3P70354 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Msx3P70354 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Msx3P70354 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Msx3P70354 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.01□□□□□ -0.49
Msx3P70354 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Msx3P70354 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Msx3P70354 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Msx3P70354 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Msx3P70354 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Msx3P70354 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Msx3P70354 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Msx3P70354 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.01□□□□□ -0.49
Msx3P70354 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Msx3P70354 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Msx3P70354 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Msx3P70354 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Msx3P70354 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.01□□□□□ -0.49
Msx3P70354 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Msx3P70354 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.01□□□□□ -0.49
Msx3P70354 Gm37666-201ENSMUST00000194110 866 ntBASIC12.01□□□□□ -0.49
Msx3P70354 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.01□□□□□ -0.49
Msx3P70354 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Msx3P70354 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.01□□□□□ -0.49
Msx3P70354 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Msx3P70354 Gm10254-201ENSMUST00000052888 867 ntBASIC12.01□□□□□ -0.49
Msx3P70354 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Msx3P70354 Olfr582-201ENSMUST00000098212 960 ntBASIC12.01□□□□□ -0.49
Msx3P70354 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Msx3P70354 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.01□□□□□ -0.49
Msx3P70354 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.01□□□□□ -0.49
Msx3P70354 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Msx3P70354 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Msx3P70354 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Msx3P70354 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Msx3P70354 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Msx3P70354 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms