Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12□□□□□ -0.49
Ybx1P62960 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ybx1P62960 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Ybx1P62960 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC12□□□□□ -0.49
Ybx1P62960 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC12□□□□□ -0.49
Ybx1P62960 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12□□□□□ -0.49
Ybx1P62960 Gm5451-201ENSMUST00000080545 579 ntBASIC12□□□□□ -0.49
Ybx1P62960 Gm23105-201ENSMUST00000083719 134 ntBASIC12□□□□□ -0.49
Ybx1P62960 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12□□□□□ -0.49
Ybx1P62960 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Ybx1P62960 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ybx1P62960 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ybx1P62960 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Ybx1P62960 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ybx1P62960 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Ybx1P62960 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ybx1P62960 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ybx1P62960 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ybx1P62960 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ybx1P62960 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ybx1P62960 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ybx1P62960 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ybx1P62960 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Ybx1P62960 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Ybx1P62960 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ybx1P62960 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.99□□□□□ -0.49
Ybx1P62960 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ybx1P62960 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ybx1P62960 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ybx1P62960 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ybx1P62960 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Ybx1P62960 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ybx1P62960 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ybx1P62960 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ybx1P62960 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ybx1P62960 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC11.99□□□□□ -0.49
Ybx1P62960 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Ybx1P62960 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC11.99□□□□□ -0.49
Ybx1P62960 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ybx1P62960 Gm18558-201ENSMUST00000186253 1214 ntBASIC11.99□□□□□ -0.49
Ybx1P62960 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Ybx1P62960 AC124433.1-201ENSMUST00000224483 1063 ntBASIC11.99□□□□□ -0.49
Ybx1P62960 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Ybx1P62960 Gm23680-201ENSMUST00000083162 164 ntBASIC11.99□□□□□ -0.49
Ybx1P62960 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Ybx1P62960 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ybx1P62960 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC11.99□□□□□ -0.49
Ybx1P62960 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.99□□□□□ -0.49
Ybx1P62960 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ybx1P62960 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ybx1P62960 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.99□□□□□ -0.49
Ybx1P62960 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ybx1P62960 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Ybx1P62960 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ybx1P62960 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ybx1P62960 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ybx1P62960 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ybx1P62960 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ybx1P62960 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ybx1P62960 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ybx1P62960 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.98□□□□□ -0.49
Ybx1P62960 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC11.98□□□□□ -0.49
Ybx1P62960 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ybx1P62960 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ybx1P62960 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ybx1P62960 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ybx1P62960 Gm6655-201ENSMUST00000201932 1309 ntBASIC11.98□□□□□ -0.49
Ybx1P62960 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.98□□□□□ -0.49
Ybx1P62960 Gm25766-201ENSMUST00000104101 131 ntBASIC11.98□□□□□ -0.49
Ybx1P62960 Gm9089-201ENSMUST00000122027 526 ntBASIC11.98□□□□□ -0.49
Ybx1P62960 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC11.98□□□□□ -0.49
Ybx1P62960 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC11.98□□□□□ -0.49
Ybx1P62960 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.98□□□□□ -0.49
Ybx1P62960 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ybx1P62960 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ybx1P62960 Gm7504-201ENSMUST00000201449 424 ntBASIC11.98□□□□□ -0.49
Ybx1P62960 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC11.98□□□□□ -0.49
Ybx1P62960 Gm3017-201ENSMUST00000203603 1126 ntBASIC11.98□□□□□ -0.49
Ybx1P62960 Gm45410-201ENSMUST00000211331 1093 ntBASIC11.98□□□□□ -0.49
Ybx1P62960 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.98□□□□□ -0.49
Ybx1P62960 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ybx1P62960 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ybx1P62960 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ybx1P62960 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.98□□□□□ -0.49
Ybx1P62960 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ybx1P62960 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ybx1P62960 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ybx1P62960 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ybx1P62960 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ybx1P62960 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ybx1P62960 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ybx1P62960 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.98□□□□□ -0.49
Ybx1P62960 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.98□□□□□ -0.49
Ybx1P62960 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ybx1P62960 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ybx1P62960 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ybx1P62960 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ybx1P62960 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ybx1P62960 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ybx1P62960 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms