Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lmo4P61969 Gm44190-201ENSMUST00000205083 1401 ntBASIC9.45□□□□□ -0.9
Lmo4P61969 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Lmo4P61969 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lmo4P61969 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lmo4P61969 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lmo4P61969 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Lmo4P61969 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lmo4P61969 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC9.45□□□□□ -0.9
Lmo4P61969 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lmo4P61969 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lmo4P61969 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lmo4P61969 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lmo4P61969 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lmo4P61969 Gm43242-201ENSMUST00000199507 1776 ntBASIC9.45□□□□□ -0.9
Lmo4P61969 Ntrk2-204ENSMUST00000224259 3049 ntBASIC9.45□□□□□ -0.9
Lmo4P61969 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Lmo4P61969 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lmo4P61969 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC9.45□□□□□ -0.9
Lmo4P61969 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Lmo4P61969 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC9.44□□□□□ -0.9
Lmo4P61969 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lmo4P61969 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Lmo4P61969 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lmo4P61969 Gm20554-201ENSMUST00000177421 2352 ntBASIC9.44□□□□□ -0.9
Lmo4P61969 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Lmo4P61969 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lmo4P61969 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lmo4P61969 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lmo4P61969 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lmo4P61969 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Lmo4P61969 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Lmo4P61969 Gm13668-201ENSMUST00000119237 1001 ntBASIC9.44□□□□□ -0.9
Lmo4P61969 Gm16219-201ENSMUST00000120096 274 ntBASIC9.44□□□□□ -0.9
Lmo4P61969 Gm11675-201ENSMUST00000121873 832 ntBASIC9.44□□□□□ -0.9
Lmo4P61969 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC9.44□□□□□ -0.9
Lmo4P61969 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC9.44□□□□□ -0.9
Lmo4P61969 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Lmo4P61969 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Lmo4P61969 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Lmo4P61969 Mir6407-201ENSMUST00000184510 101 ntBASIC9.44□□□□□ -0.9
Lmo4P61969 Gm29410-201ENSMUST00000188383 694 ntBASIC9.44□□□□□ -0.9
Lmo4P61969 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC9.44□□□□□ -0.9
Lmo4P61969 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lmo4P61969 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lmo4P61969 AC114645.1-201ENSMUST00000215831 187 ntBASIC9.44□□□□□ -0.9
Lmo4P61969 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lmo4P61969 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lmo4P61969 n-R5s211-201ENSMUST00000093689 119 ntBASIC9.44□□□□□ -0.9
Lmo4P61969 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lmo4P61969 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Lmo4P61969 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lmo4P61969 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lmo4P61969 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC9.44□□□□□ -0.9
Lmo4P61969 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lmo4P61969 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Lmo4P61969 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lmo4P61969 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lmo4P61969 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Lmo4P61969 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Lmo4P61969 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC9.44□□□□□ -0.9
Lmo4P61969 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Lmo4P61969 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lmo4P61969 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lmo4P61969 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lmo4P61969 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lmo4P61969 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lmo4P61969 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lmo4P61969 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Lmo4P61969 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lmo4P61969 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lmo4P61969 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lmo4P61969 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lmo4P61969 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lmo4P61969 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lmo4P61969 Gm18986-201ENSMUST00000216029 1986 ntBASIC9.43□□□□□ -0.9
Lmo4P61969 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lmo4P61969 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lmo4P61969 Gm7841-201ENSMUST00000122108 1629 ntBASIC9.43□□□□□ -0.9
Lmo4P61969 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lmo4P61969 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lmo4P61969 Gm25063-201ENSMUST00000104666 94 ntBASIC9.43□□□□□ -0.9
Lmo4P61969 Gm13422-201ENSMUST00000118834 504 ntBASIC9.43□□□□□ -0.9
Lmo4P61969 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC9.43□□□□□ -0.9
Lmo4P61969 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC9.43□□□□□ -0.9
Lmo4P61969 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC9.43□□□□□ -0.9
Lmo4P61969 Gm25492-201ENSMUST00000157383 129 ntBASIC9.43□□□□□ -0.9
Lmo4P61969 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC9.43□□□□□ -0.9
Lmo4P61969 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lmo4P61969 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC9.43□□□□□ -0.9
Lmo4P61969 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC9.43□□□□□ -0.9
Lmo4P61969 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC9.43□□□□□ -0.9
Lmo4P61969 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC9.43□□□□□ -0.9
Lmo4P61969 Gm19091-201ENSMUST00000208120 978 ntBASIC9.43□□□□□ -0.9
Lmo4P61969 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
Lmo4P61969 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lmo4P61969 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lmo4P61969 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Lmo4P61969 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lmo4P61969 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms