Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC11.68□□□□□ -0.54
Atxn1P54254 Gm37458-201ENSMUST00000194055 410 ntBASIC11.68□□□□□ -0.54
Atxn1P54254 Gm3017-201ENSMUST00000203603 1126 ntBASIC11.68□□□□□ -0.54
Atxn1P54254 Gm5340-201ENSMUST00000203733 880 ntBASIC11.68□□□□□ -0.54
Atxn1P54254 Gm44124-201ENSMUST00000204159 472 ntBASIC11.68□□□□□ -0.54
Atxn1P54254 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.68□□□□□ -0.54
Atxn1P54254 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.68□□□□□ -0.54
Atxn1P54254 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.68□□□□□ -0.54
Atxn1P54254 Gm18499-201ENSMUST00000220808 1021 ntBASIC11.68□□□□□ -0.54
Atxn1P54254 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.68□□□□□ -0.54
Atxn1P54254 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Atxn1P54254 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atxn1P54254 Gm26035-201ENSMUST00000083065 308 ntBASIC11.68□□□□□ -0.54
Atxn1P54254 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atxn1P54254 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Atxn1P54254 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atxn1P54254 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atxn1P54254 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Atxn1P54254 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Atxn1P54254 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atxn1P54254 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Atxn1P54254 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atxn1P54254 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atxn1P54254 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Atxn1P54254 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atxn1P54254 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Atxn1P54254 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Atxn1P54254 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Atxn1P54254 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atxn1P54254 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.67□□□□□ -0.54
Atxn1P54254 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Atxn1P54254 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.67□□□□□ -0.54
Atxn1P54254 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atxn1P54254 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atxn1P54254 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atxn1P54254 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atxn1P54254 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.67□□□□□ -0.54
Atxn1P54254 Gm24791-201ENSMUST00000104284 131 ntBASIC11.67□□□□□ -0.54
Atxn1P54254 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Atxn1P54254 Gm7722-201ENSMUST00000120646 741 ntBASIC11.67□□□□□ -0.54
Atxn1P54254 Gm8451-201ENSMUST00000170338 447 ntBASIC11.67□□□□□ -0.54
Atxn1P54254 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Atxn1P54254 Gm9135-201ENSMUST00000182963 990 ntBASIC11.67□□□□□ -0.54
Atxn1P54254 Mir6407-201ENSMUST00000184510 101 ntBASIC11.67□□□□□ -0.54
Atxn1P54254 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Atxn1P54254 Gm43275-201ENSMUST00000202053 1020 ntBASIC11.67□□□□□ -0.54
Atxn1P54254 Gm44958-201ENSMUST00000203734 736 ntBASIC11.67□□□□□ -0.54
Atxn1P54254 Gm44647-201ENSMUST00000207402 428 ntBASIC11.67□□□□□ -0.54
Atxn1P54254 Gm18706-201ENSMUST00000210053 1066 ntBASIC11.67□□□□□ -0.54
Atxn1P54254 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC11.67□□□□□ -0.54
Atxn1P54254 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Atxn1P54254 AC153962.2-201ENSMUST00000219417 550 ntBASIC11.67□□□□□ -0.54
Atxn1P54254 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atxn1P54254 AC124433.1-201ENSMUST00000224483 1063 ntBASIC11.67□□□□□ -0.54
Atxn1P54254 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atxn1P54254 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atxn1P54254 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atxn1P54254 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atxn1P54254 Gm7536-201ENSMUST00000077389 444 ntBASIC11.67□□□□□ -0.54
Atxn1P54254 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.67□□□□□ -0.54
Atxn1P54254 Gm5453-201ENSMUST00000080866 447 ntBASIC11.67□□□□□ -0.54
Atxn1P54254 Gm23680-201ENSMUST00000083162 164 ntBASIC11.67□□□□□ -0.54
Atxn1P54254 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atxn1P54254 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atxn1P54254 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atxn1P54254 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atxn1P54254 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Atxn1P54254 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atxn1P54254 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atxn1P54254 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atxn1P54254 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Atxn1P54254 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.67□□□□□ -0.54
Atxn1P54254 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atxn1P54254 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Atxn1P54254 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Atxn1P54254 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.67□□□□□ -0.54
Atxn1P54254 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atxn1P54254 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Atxn1P54254 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Atxn1P54254 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Atxn1P54254 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atxn1P54254 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atxn1P54254 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Atxn1P54254 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Atxn1P54254 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Atxn1P54254 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atxn1P54254 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Atxn1P54254 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atxn1P54254 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atxn1P54254 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.66□□□□□ -0.54
Atxn1P54254 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atxn1P54254 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atxn1P54254 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atxn1P54254 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atxn1P54254 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atxn1P54254 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atxn1P54254 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atxn1P54254 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atxn1P54254 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Atxn1P54254 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms