Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-6P43688 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-6P43688 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-6P43688 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-6P43688 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-6P43688 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-6P43688 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-6P43688 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-6P43688 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-6P43688 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-6P43688 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-6P43688 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-6P43688 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-6P43688 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.1□□□□□ -0.63
Nkx2-6P43688 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-6P43688 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-6P43688 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-6P43688 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Nkx2-6P43688 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-6P43688 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Nkx2-6P43688 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-6P43688 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-6P43688 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-6P43688 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-6P43688 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-6P43688 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Nkx2-6P43688 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-6P43688 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC11.1□□□□□ -0.63
Nkx2-6P43688 Gm14942-201ENSMUST00000119642 336 ntBASIC11.1□□□□□ -0.63
Nkx2-6P43688 Gm12036-201ENSMUST00000120008 530 ntBASIC11.1□□□□□ -0.63
Nkx2-6P43688 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-6P43688 Gm3150-201ENSMUST00000166418 204 ntBASIC11.1□□□□□ -0.63
Nkx2-6P43688 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC11.1□□□□□ -0.63
Nkx2-6P43688 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-6P43688 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-6P43688 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.1□□□□□ -0.63
Nkx2-6P43688 Gm9645-201ENSMUST00000197131 792 ntBASIC11.1□□□□□ -0.63
Nkx2-6P43688 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC11.1□□□□□ -0.63
Nkx2-6P43688 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC11.1□□□□□ -0.63
Nkx2-6P43688 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC11.1□□□□□ -0.63
Nkx2-6P43688 CT485606.1-201ENSMUST00000213187 878 ntBASIC11.1□□□□□ -0.63
Nkx2-6P43688 AC140293.1-201ENSMUST00000225626 1247 ntBASIC11.1□□□□□ -0.63
Nkx2-6P43688 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-6P43688 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Nkx2-6P43688 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-6P43688 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Nkx2-6P43688 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-6P43688 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Nkx2-6P43688 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-6P43688 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-6P43688 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Nkx2-6P43688 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-6P43688 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-6P43688 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-6P43688 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.1□□□□□ -0.63
Nkx2-6P43688 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-6P43688 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-6P43688 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-6P43688 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-6P43688 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-6P43688 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Nkx2-6P43688 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-6P43688 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-6P43688 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-6P43688 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-6P43688 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-6P43688 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-6P43688 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-6P43688 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-6P43688 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-6P43688 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.09□□□□□ -0.63
Nkx2-6P43688 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Nkx2-6P43688 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Nkx2-6P43688 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.09□□□□□ -0.63
Nkx2-6P43688 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-6P43688 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Nkx2-6P43688 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-6P43688 Gm12795-201ENSMUST00000117594 539 ntBASIC11.09□□□□□ -0.63
Nkx2-6P43688 Gm11836-201ENSMUST00000121022 441 ntBASIC11.09□□□□□ -0.63
Nkx2-6P43688 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-6P43688 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-6P43688 Gm26047-201ENSMUST00000157308 113 ntBASIC11.09□□□□□ -0.63
Nkx2-6P43688 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC11.09□□□□□ -0.63
Nkx2-6P43688 Gm23153-201ENSMUST00000175323 313 ntBASIC11.09□□□□□ -0.63
Nkx2-6P43688 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-6P43688 Gm3551-201ENSMUST00000190750 664 ntBASIC11.09□□□□□ -0.63
Nkx2-6P43688 Gm9136-201ENSMUST00000193368 454 ntBASIC11.09□□□□□ -0.63
Nkx2-6P43688 Gm42518-201ENSMUST00000196277 938 ntBASIC11.09□□□□□ -0.63
Nkx2-6P43688 Gm43520-201ENSMUST00000197996 164 ntBASIC11.09□□□□□ -0.63
Nkx2-6P43688 Gm26047-202ENSMUST00000198840 115 ntBASIC11.09□□□□□ -0.63
Nkx2-6P43688 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.09□□□□□ -0.63
Nkx2-6P43688 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.09□□□□□ -0.63
Nkx2-6P43688 AC165260.2-203ENSMUST00000224237 336 ntBASIC11.09□□□□□ -0.63
Nkx2-6P43688 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.09□□□□□ -0.63
Nkx2-6P43688 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-6P43688 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-6P43688 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-6P43688 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-6P43688 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-6P43688 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms