Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
HttP42859 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
HttP42859 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
HttP42859 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
HttP42859 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HttP42859 Gm28424-201ENSMUST00000187393 1319 ntBASIC12.06□□□□□ -0.48
HttP42859 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HttP42859 Gm12463-201ENSMUST00000118271 849 ntBASIC12.06□□□□□ -0.48
HttP42859 Gm12072-201ENSMUST00000118293 715 ntBASIC12.06□□□□□ -0.48
HttP42859 Gm14227-201ENSMUST00000119431 629 ntBASIC12.06□□□□□ -0.48
HttP42859 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC12.06□□□□□ -0.48
HttP42859 Gm15258-201ENSMUST00000153801 741 ntBASIC12.06□□□□□ -0.48
HttP42859 Gm7805-201ENSMUST00000154348 448 ntBASIC12.06□□□□□ -0.48
HttP42859 Pttg1ip-208ENSMUST00000162943 721 ntAPPRIS ALT2 TSL 3 BASIC12.06□□□□□ -0.48
HttP42859 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC12.06□□□□□ -0.48
HttP42859 Gm7880-201ENSMUST00000203748 871 ntBASIC12.06□□□□□ -0.48
HttP42859 Gm45808-201ENSMUST00000210701 789 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
HttP42859 AC132881.1-201ENSMUST00000223780 1062 ntBASIC12.06□□□□□ -0.48
HttP42859 1700069L16Rik-201ENSMUST00000047891 537 ntAPPRIS P5 TSL 2 BASIC12.06□□□□□ -0.48
HttP42859 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
HttP42859 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HttP42859 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HttP42859 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
HttP42859 Gm9915-201ENSMUST00000066196 1383 ntBASIC12.05□□□□□ -0.48
HttP42859 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
HttP42859 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
HttP42859 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.05□□□□□ -0.48
HttP42859 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
HttP42859 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HttP42859 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
HttP42859 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC12.05□□□□□ -0.48
HttP42859 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
HttP42859 Gm14145-201ENSMUST00000133385 508 ntTSL 3 BASIC12.05□□□□□ -0.48
HttP42859 Gm14146-201ENSMUST00000155885 508 ntTSL 5 BASIC12.05□□□□□ -0.48
HttP42859 Rab26-204ENSMUST00000176533 965 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
HttP42859 Gm33969-201ENSMUST00000197615 388 ntTSL 3 BASIC12.05□□□□□ -0.48
HttP42859 Gm5194-201ENSMUST00000221457 742 ntBASIC12.05□□□□□ -0.48
HttP42859 Gm5191-201ENSMUST00000222882 1236 ntBASIC12.05□□□□□ -0.48
HttP42859 Mcu-201ENSMUST00000009791 1079 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
HttP42859 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
HttP42859 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HttP42859 Uros-204ENSMUST00000106146 1483 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
HttP42859 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
HttP42859 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HttP42859 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
HttP42859 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HttP42859 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HttP42859 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HttP42859 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HttP42859 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
HttP42859 Rpl17-ps11-201ENSMUST00000161946 729 ntBASIC12.05□□□□□ -0.48
HttP42859 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
HttP42859 Snord55-201ENSMUST00000174939 79 ntBASIC12.05□□□□□ -0.48
HttP42859 Gm28499-201ENSMUST00000191576 666 ntTSL 2 BASIC12.05□□□□□ -0.48
HttP42859 Fxyd7-202ENSMUST00000206341 620 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
HttP42859 Gm18042-201ENSMUST00000219887 790 ntBASIC12.05□□□□□ -0.48
HttP42859 Gm34667-201ENSMUST00000222974 1258 ntTSL 5 BASIC12.05□□□□□ -0.48
HttP42859 Fxyd7-201ENSMUST00000073892 693 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
HttP42859 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
HttP42859 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.05□□□□□ -0.48
HttP42859 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HttP42859 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HttP42859 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
HttP42859 Gm29101-201ENSMUST00000188329 1471 ntBASIC12.05□□□□□ -0.48
HttP42859 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
HttP42859 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HttP42859 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HttP42859 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HttP42859 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HttP42859 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC12.04□□□□□ -0.48
HttP42859 Gm24466-201ENSMUST00000179978 109 ntBASIC12.04□□□□□ -0.48
HttP42859 Gm33570-201ENSMUST00000207608 1254 ntTSL 5 BASIC12.04□□□□□ -0.48
HttP42859 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HttP42859 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.04□□□□□ -0.48
HttP42859 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HttP42859 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
HttP42859 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
HttP42859 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
HttP42859 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
HttP42859 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
HttP42859 Fcrl1-206ENSMUST00000194786 1540 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
HttP42859 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HttP42859 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.04□□□□□ -0.48
HttP42859 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
HttP42859 Epp13-201ENSMUST00000121024 957 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
HttP42859 Gm25694-201ENSMUST00000175448 282 ntBASIC12.04□□□□□ -0.48
HttP42859 Gm4866-201ENSMUST00000197408 589 ntBASIC12.04□□□□□ -0.48
HttP42859 Gm36172-201ENSMUST00000219852 723 ntTSL 3 BASIC12.04□□□□□ -0.48
HttP42859 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HttP42859 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HttP42859 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.04□□□□□ -0.48
HttP42859 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HttP42859 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HttP42859 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.04□□□□□ -0.48
HttP42859 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
HttP42859 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
HttP42859 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
HttP42859 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.04□□□□□ -0.48
HttP42859 Rpl7a-ps12-201ENSMUST00000120384 794 ntBASIC12.04□□□□□ -0.48
HttP42859 Gm8464-202ENSMUST00000146697 1142 ntBASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms