Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx1-2P42580 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx1-2P42580 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx1-2P42580 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx1-2P42580 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Nkx1-2P42580 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx1-2P42580 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Nkx1-2P42580 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC14.37□□□□□ -0.11
Nkx1-2P42580 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx1-2P42580 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx1-2P42580 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx1-2P42580 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx1-2P42580 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx1-2P42580 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx1-2P42580 Gm22323-201ENSMUST00000103832 109 ntBASIC14.37□□□□□ -0.11
Nkx1-2P42580 Gm15004-201ENSMUST00000119192 630 ntBASIC14.37□□□□□ -0.11
Nkx1-2P42580 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx1-2P42580 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx1-2P42580 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC14.37□□□□□ -0.11
Nkx1-2P42580 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC14.37□□□□□ -0.11
Nkx1-2P42580 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC14.37□□□□□ -0.11
Nkx1-2P42580 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Nkx1-2P42580 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Nkx1-2P42580 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx1-2P42580 Gm32999-201ENSMUST00000192693 562 ntBASIC14.37□□□□□ -0.11
Nkx1-2P42580 Rprl1-202ENSMUST00000198476 238 ntBASIC14.37□□□□□ -0.11
Nkx1-2P42580 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC14.37□□□□□ -0.11
Nkx1-2P42580 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx1-2P42580 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx1-2P42580 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Nkx1-2P42580 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx1-2P42580 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx1-2P42580 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx1-2P42580 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC14.37□□□□□ -0.11
Nkx1-2P42580 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx1-2P42580 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Nkx1-2P42580 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx1-2P42580 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx1-2P42580 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx1-2P42580 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx1-2P42580 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx1-2P42580 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkx1-2P42580 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx1-2P42580 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx1-2P42580 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Nkx1-2P42580 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx1-2P42580 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Nkx1-2P42580 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx1-2P42580 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx1-2P42580 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx1-2P42580 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx1-2P42580 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx1-2P42580 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx1-2P42580 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx1-2P42580 Gm19327-201ENSMUST00000220651 3271 ntBASIC14.36□□□□□ -0.11
Nkx1-2P42580 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx1-2P42580 AC173482.6-201ENSMUST00000225889 1741 ntBASIC14.36□□□□□ -0.11
Nkx1-2P42580 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Nkx1-2P42580 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx1-2P42580 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Nkx1-2P42580 Gm11960-201ENSMUST00000122068 925 ntBASIC14.36□□□□□ -0.11
Nkx1-2P42580 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC14.36□□□□□ -0.11
Nkx1-2P42580 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Nkx1-2P42580 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx1-2P42580 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Nkx1-2P42580 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC14.36□□□□□ -0.11
Nkx1-2P42580 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC14.36□□□□□ -0.11
Nkx1-2P42580 Gm38341-201ENSMUST00000195357 515 ntBASIC14.36□□□□□ -0.11
Nkx1-2P42580 Gm43758-201ENSMUST00000199500 367 ntBASIC14.36□□□□□ -0.11
Nkx1-2P42580 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC14.36□□□□□ -0.11
Nkx1-2P42580 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx1-2P42580 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx1-2P42580 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC14.36□□□□□ -0.11
Nkx1-2P42580 Gm18615-201ENSMUST00000222919 1031 ntBASIC14.36□□□□□ -0.11
Nkx1-2P42580 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx1-2P42580 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx1-2P42580 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Nkx1-2P42580 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Nkx1-2P42580 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Nkx1-2P42580 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx1-2P42580 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx1-2P42580 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx1-2P42580 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Nkx1-2P42580 Gm11661-201ENSMUST00000121761 1327 ntBASIC14.36□□□□□ -0.11
Nkx1-2P42580 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx1-2P42580 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx1-2P42580 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx1-2P42580 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx1-2P42580 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Nkx1-2P42580 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Nkx1-2P42580 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx1-2P42580 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx1-2P42580 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx1-2P42580 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Nkx1-2P42580 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx1-2P42580 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx1-2P42580 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Nkx1-2P42580 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx1-2P42580 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx1-2P42580 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms