Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.03□□□□□ -0.48
Cxcl12P40224 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl12P40224 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cxcl12P40224 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cxcl12P40224 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cxcl12P40224 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl12P40224 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cxcl12P40224 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl12P40224 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl12P40224 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC12.03□□□□□ -0.48
Cxcl12P40224 Gm27956-201ENSMUST00000175604 260 ntBASIC12.03□□□□□ -0.48
Cxcl12P40224 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl12P40224 Gm6644-201ENSMUST00000186507 951 ntBASIC12.03□□□□□ -0.48
Cxcl12P40224 Gm2448-201ENSMUST00000207080 559 ntBASIC12.03□□□□□ -0.48
Cxcl12P40224 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC12.03□□□□□ -0.48
Cxcl12P40224 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC12.03□□□□□ -0.48
Cxcl12P40224 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.03□□□□□ -0.48
Cxcl12P40224 AC102847.1-202ENSMUST00000226313 1245 ntBASIC12.03□□□□□ -0.48
Cxcl12P40224 AC138716.2-201ENSMUST00000226670 1016 ntBASIC12.03□□□□□ -0.48
Cxcl12P40224 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl12P40224 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl12P40224 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cxcl12P40224 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl12P40224 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cxcl12P40224 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC12.03□□□□□ -0.48
Cxcl12P40224 Mir326-201ENSMUST00000083637 95 ntBASIC12.03□□□□□ -0.48
Cxcl12P40224 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
Cxcl12P40224 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl12P40224 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl12P40224 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl12P40224 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl12P40224 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cxcl12P40224 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl12P40224 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl12P40224 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl12P40224 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl12P40224 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl12P40224 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl12P40224 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cxcl12P40224 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl12P40224 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Cxcl12P40224 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl12P40224 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Cxcl12P40224 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cxcl12P40224 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cxcl12P40224 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cxcl12P40224 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Cxcl12P40224 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.02□□□□□ -0.48
Cxcl12P40224 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Cxcl12P40224 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cxcl12P40224 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cxcl12P40224 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cxcl12P40224 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Cxcl12P40224 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cxcl12P40224 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl12P40224 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl12P40224 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl12P40224 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl12P40224 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl12P40224 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl12P40224 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl12P40224 Gm22937-201ENSMUST00000103954 131 ntBASIC12.02□□□□□ -0.49
Cxcl12P40224 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl12P40224 Gm3329-201ENSMUST00000159873 556 ntBASIC12.02□□□□□ -0.49
Cxcl12P40224 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.49
Cxcl12P40224 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl12P40224 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl12P40224 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cxcl12P40224 Gm8384-201ENSMUST00000190905 704 ntBASIC12.02□□□□□ -0.49
Cxcl12P40224 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Cxcl12P40224 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl12P40224 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl12P40224 Gm4903-201ENSMUST00000210462 405 ntBASIC12.02□□□□□ -0.49
Cxcl12P40224 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl12P40224 Gm7525-201ENSMUST00000219425 454 ntBASIC12.02□□□□□ -0.49
Cxcl12P40224 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl12P40224 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl12P40224 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl12P40224 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl12P40224 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl12P40224 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl12P40224 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Cxcl12P40224 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl12P40224 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.49
Cxcl12P40224 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl12P40224 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl12P40224 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl12P40224 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl12P40224 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl12P40224 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.02□□□□□ -0.49
Cxcl12P40224 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cxcl12P40224 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl12P40224 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl12P40224 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl12P40224 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl12P40224 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl12P40224 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl12P40224 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl12P40224 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl12P40224 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms