Protein–RNA interactions for Protein: P39429

Traf2, TNF receptor-associated factor 2, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf2P39429 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Traf2P39429 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Traf2P39429 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Traf2P39429 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Traf2P39429 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Traf2P39429 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.79□□□□□ -0.52
Traf2P39429 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Traf2P39429 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.79□□□□□ -0.52
Traf2P39429 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Traf2P39429 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Traf2P39429 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Traf2P39429 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.79□□□□□ -0.52
Traf2P39429 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Traf2P39429 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Traf2P39429 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Traf2P39429 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Traf2P39429 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Traf2P39429 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Traf2P39429 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.79□□□□□ -0.52
Traf2P39429 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Traf2P39429 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Traf2P39429 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Traf2P39429 Gm8566-201ENSMUST00000120174 465 ntBASIC11.79□□□□□ -0.52
Traf2P39429 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Traf2P39429 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Traf2P39429 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Traf2P39429 Gm38117-201ENSMUST00000194653 939 ntBASIC11.79□□□□□ -0.52
Traf2P39429 Gm37466-201ENSMUST00000195692 652 ntBASIC11.79□□□□□ -0.52
Traf2P39429 Gm9445-201ENSMUST00000207454 1285 ntBASIC11.79□□□□□ -0.52
Traf2P39429 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Traf2P39429 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Traf2P39429 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Traf2P39429 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Traf2P39429 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Traf2P39429 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Traf2P39429 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Traf2P39429 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Traf2P39429 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Traf2P39429 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Traf2P39429 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Traf2P39429 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Traf2P39429 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Traf2P39429 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Traf2P39429 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Traf2P39429 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.79□□□□□ -0.52
Traf2P39429 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Traf2P39429 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Traf2P39429 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Traf2P39429 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Traf2P39429 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Traf2P39429 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC11.78□□□□□ -0.52
Traf2P39429 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Traf2P39429 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Traf2P39429 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Traf2P39429 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Traf2P39429 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Traf2P39429 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Traf2P39429 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Traf2P39429 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Traf2P39429 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Traf2P39429 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Traf2P39429 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.78□□□□□ -0.52
Traf2P39429 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Traf2P39429 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Traf2P39429 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.78□□□□□ -0.52
Traf2P39429 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Traf2P39429 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.78□□□□□ -0.52
Traf2P39429 Gm12501-201ENSMUST00000119163 529 ntBASIC11.78□□□□□ -0.52
Traf2P39429 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.78□□□□□ -0.52
Traf2P39429 Gm2553-201ENSMUST00000215986 605 ntBASIC11.78□□□□□ -0.52
Traf2P39429 Gm5369-201ENSMUST00000217499 588 ntBASIC11.78□□□□□ -0.52
Traf2P39429 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Traf2P39429 Gm21811-201ENSMUST00000096485 930 ntBASIC11.78□□□□□ -0.52
Traf2P39429 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Traf2P39429 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Traf2P39429 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Traf2P39429 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Traf2P39429 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Traf2P39429 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Traf2P39429 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Traf2P39429 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Traf2P39429 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Traf2P39429 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.78□□□□□ -0.52
Traf2P39429 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Traf2P39429 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Traf2P39429 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Traf2P39429 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.78□□□□□ -0.52
Traf2P39429 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Traf2P39429 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Traf2P39429 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Traf2P39429 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Traf2P39429 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Traf2P39429 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Traf2P39429 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Traf2P39429 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Traf2P39429 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.78□□□□□ -0.52
Traf2P39429 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Traf2P39429 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Traf2P39429 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Traf2P39429 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms