Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh4P39038 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh4P39038 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh4P39038 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh4P39038 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh4P39038 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh4P39038 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh4P39038 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh4P39038 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh4P39038 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh4P39038 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Cdh4P39038 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
Cdh4P39038 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh4P39038 Gm14058-201ENSMUST00000116082 735 ntBASIC11.24□□□□□ -0.61
Cdh4P39038 Gm13035-201ENSMUST00000117496 342 ntBASIC11.24□□□□□ -0.61
Cdh4P39038 Gm15207-201ENSMUST00000119259 442 ntBASIC11.24□□□□□ -0.61
Cdh4P39038 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.24□□□□□ -0.61
Cdh4P39038 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.24□□□□□ -0.61
Cdh4P39038 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh4P39038 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.24□□□□□ -0.61
Cdh4P39038 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.24□□□□□ -0.61
Cdh4P39038 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.24□□□□□ -0.61
Cdh4P39038 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh4P39038 Gm4310-201ENSMUST00000177847 889 ntBASIC11.24□□□□□ -0.61
Cdh4P39038 Gm38117-201ENSMUST00000194653 939 ntBASIC11.24□□□□□ -0.61
Cdh4P39038 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.24□□□□□ -0.61
Cdh4P39038 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Cdh4P39038 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.24□□□□□ -0.61
Cdh4P39038 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh4P39038 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.24□□□□□ -0.61
Cdh4P39038 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh4P39038 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Cdh4P39038 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh4P39038 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh4P39038 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Cdh4P39038 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh4P39038 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh4P39038 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh4P39038 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh4P39038 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Cdh4P39038 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.24□□□□□ -0.61
Cdh4P39038 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cdh4P39038 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Cdh4P39038 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Cdh4P39038 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.23□□□□□ -0.61
Cdh4P39038 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdh4P39038 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Cdh4P39038 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Cdh4P39038 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdh4P39038 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cdh4P39038 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdh4P39038 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdh4P39038 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdh4P39038 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Cdh4P39038 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdh4P39038 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdh4P39038 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cdh4P39038 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdh4P39038 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdh4P39038 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdh4P39038 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdh4P39038 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdh4P39038 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Cdh4P39038 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.23□□□□□ -0.61
Cdh4P39038 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.23□□□□□ -0.61
Cdh4P39038 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Cdh4P39038 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.23□□□□□ -0.61
Cdh4P39038 Mir5120-201ENSMUST00000175020 78 ntBASIC11.23□□□□□ -0.61
Cdh4P39038 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Cdh4P39038 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cdh4P39038 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.23□□□□□ -0.61
Cdh4P39038 Gm43068-201ENSMUST00000201095 1273 ntBASIC11.23□□□□□ -0.61
Cdh4P39038 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdh4P39038 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdh4P39038 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.23□□□□□ -0.61
Cdh4P39038 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.23□□□□□ -0.61
Cdh4P39038 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.23□□□□□ -0.61
Cdh4P39038 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdh4P39038 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cdh4P39038 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.23□□□□□ -0.61
Cdh4P39038 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cdh4P39038 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.23□□□□□ -0.61
Cdh4P39038 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdh4P39038 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cdh4P39038 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Cdh4P39038 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdh4P39038 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Cdh4P39038 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.23□□□□□ -0.61
Cdh4P39038 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Cdh4P39038 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Cdh4P39038 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdh4P39038 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdh4P39038 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Cdh4P39038 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Cdh4P39038 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cdh4P39038 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh4P39038 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.22□□□□□ -0.61
Cdh4P39038 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh4P39038 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh4P39038 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms