Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rom1P32958 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Rom1P32958 Gm9996-201ENSMUST00000070359 913 ntBASIC9.25□□□□□ -0.93
Rom1P32958 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rom1P32958 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Rom1P32958 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rom1P32958 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Rom1P32958 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Rom1P32958 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rom1P32958 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Rom1P32958 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC9.25□□□□□ -0.93
Rom1P32958 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Rom1P32958 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rom1P32958 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Rom1P32958 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Rom1P32958 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rom1P32958 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Rom1P32958 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC9.25□□□□□ -0.93
Rom1P32958 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rom1P32958 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rom1P32958 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rom1P32958 Gm10110-202ENSMUST00000228705 3220 ntBASIC9.25□□□□□ -0.93
Rom1P32958 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rom1P32958 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rom1P32958 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Rom1P32958 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC9.24□□□□□ -0.93
Rom1P32958 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Rom1P32958 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Rom1P32958 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Rom1P32958 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Rom1P32958 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Rom1P32958 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Rom1P32958 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Rom1P32958 AC167565.1-201ENSMUST00000226980 1833 ntBASIC9.24□□□□□ -0.93
Rom1P32958 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Rom1P32958 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Rom1P32958 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Rom1P32958 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Rom1P32958 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Rom1P32958 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC9.24□□□□□ -0.93
Rom1P32958 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Rom1P32958 AC129931.1-201ENSMUST00000228865 1861 ntBASIC9.24□□□□□ -0.93
Rom1P32958 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Rom1P32958 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Rom1P32958 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Rom1P32958 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Rom1P32958 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC9.24□□□□□ -0.93
Rom1P32958 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Rom1P32958 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Rom1P32958 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Rom1P32958 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC9.24□□□□□ -0.93
Rom1P32958 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
Rom1P32958 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC9.24□□□□□ -0.93
Rom1P32958 Gm9192-201ENSMUST00000183221 985 ntBASIC9.24□□□□□ -0.93
Rom1P32958 Gm28882-201ENSMUST00000185504 314 ntBASIC9.24□□□□□ -0.93
Rom1P32958 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC9.24□□□□□ -0.93
Rom1P32958 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Rom1P32958 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC9.24□□□□□ -0.93
Rom1P32958 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Rom1P32958 Gm35850-202ENSMUST00000211705 2120 ntBASIC9.24□□□□□ -0.93
Rom1P32958 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC9.24□□□□□ -0.93
Rom1P32958 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC9.24□□□□□ -0.93
Rom1P32958 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC9.24□□□□□ -0.93
Rom1P32958 AC159006.1-201ENSMUST00000226396 258 ntBASIC9.24□□□□□ -0.93
Rom1P32958 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC9.24□□□□□ -0.93
Rom1P32958 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Rom1P32958 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Rom1P32958 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Rom1P32958 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Rom1P32958 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Rom1P32958 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Rom1P32958 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Rom1P32958 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Rom1P32958 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC9.24□□□□□ -0.93
Rom1P32958 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC9.24□□□□□ -0.93
Rom1P32958 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC9.24□□□□□ -0.93
Rom1P32958 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Rom1P32958 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Rom1P32958 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Rom1P32958 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Rom1P32958 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Rom1P32958 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Rom1P32958 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Rom1P32958 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Rom1P32958 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rom1P32958 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rom1P32958 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC9.23□□□□□ -0.93
Rom1P32958 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Rom1P32958 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Rom1P32958 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC9.23□□□□□ -0.93
Rom1P32958 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Rom1P32958 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rom1P32958 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rom1P32958 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC9.23□□□□□ -0.93
Rom1P32958 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rom1P32958 Gm8752-201ENSMUST00000173427 1694 ntBASIC9.23□□□□□ -0.93
Rom1P32958 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rom1P32958 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Rom1P32958 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Rom1P32958 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms