Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nedd8P29595 Gm14441-201ENSMUST00000121960 540 ntBASIC10.76□□□□□ -0.69
Nedd8P29595 Gm12363-201ENSMUST00000122250 668 ntBASIC10.76□□□□□ -0.69
Nedd8P29595 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.76□□□□□ -0.69
Nedd8P29595 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC10.76□□□□□ -0.69
Nedd8P29595 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nedd8P29595 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC10.76□□□□□ -0.69
Nedd8P29595 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC10.76□□□□□ -0.69
Nedd8P29595 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nedd8P29595 Gm27306-201ENSMUST00000183970 107 ntBASIC10.76□□□□□ -0.69
Nedd8P29595 Igkv2-116-201ENSMUST00000199327 362 ntBASIC10.76□□□□□ -0.69
Nedd8P29595 Gm19163-201ENSMUST00000223313 780 ntBASIC10.76□□□□□ -0.69
Nedd8P29595 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nedd8P29595 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nedd8P29595 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nedd8P29595 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Nedd8P29595 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nedd8P29595 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nedd8P29595 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Nedd8P29595 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nedd8P29595 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC10.76□□□□□ -0.69
Nedd8P29595 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.76□□□□□ -0.69
Nedd8P29595 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nedd8P29595 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nedd8P29595 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Nedd8P29595 Gm37333-201ENSMUST00000192904 2251 ntBASIC10.75□□□□□ -0.69
Nedd8P29595 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nedd8P29595 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nedd8P29595 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nedd8P29595 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nedd8P29595 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nedd8P29595 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Nedd8P29595 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nedd8P29595 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nedd8P29595 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC10.75□□□□□ -0.69
Nedd8P29595 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
Nedd8P29595 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nedd8P29595 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nedd8P29595 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nedd8P29595 Gm8228-201ENSMUST00000189949 2192 ntBASIC10.75□□□□□ -0.69
Nedd8P29595 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nedd8P29595 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nedd8P29595 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Nedd8P29595 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Nedd8P29595 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Nedd8P29595 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nedd8P29595 Gm11594-201ENSMUST00000122313 162 ntBASIC10.75□□□□□ -0.69
Nedd8P29595 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.75□□□□□ -0.69
Nedd8P29595 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nedd8P29595 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nedd8P29595 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC10.75□□□□□ -0.69
Nedd8P29595 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
Nedd8P29595 Gm8598-201ENSMUST00000221184 836 ntBASIC10.75□□□□□ -0.69
Nedd8P29595 AC125209.1-201ENSMUST00000225812 766 ntBASIC10.75□□□□□ -0.69
Nedd8P29595 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nedd8P29595 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nedd8P29595 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
Nedd8P29595 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nedd8P29595 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nedd8P29595 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nedd8P29595 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC10.75□□□□□ -0.69
Nedd8P29595 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nedd8P29595 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nedd8P29595 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Nedd8P29595 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nedd8P29595 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nedd8P29595 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nedd8P29595 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nedd8P29595 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nedd8P29595 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Nedd8P29595 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nedd8P29595 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nedd8P29595 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nedd8P29595 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nedd8P29595 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nedd8P29595 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nedd8P29595 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nedd8P29595 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Nedd8P29595 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Nedd8P29595 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nedd8P29595 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Nedd8P29595 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nedd8P29595 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nedd8P29595 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nedd8P29595 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC10.74□□□□□ -0.69
Nedd8P29595 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC10.74□□□□□ -0.69
Nedd8P29595 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nedd8P29595 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nedd8P29595 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nedd8P29595 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nedd8P29595 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nedd8P29595 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nedd8P29595 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Nedd8P29595 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nedd8P29595 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC10.74□□□□□ -0.69
Nedd8P29595 Gm13369-201ENSMUST00000119442 987 ntBASIC10.74□□□□□ -0.69
Nedd8P29595 Gm15321-201ENSMUST00000121290 288 ntBASIC10.74□□□□□ -0.69
Nedd8P29595 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.74□□□□□ -0.69
Nedd8P29595 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.74□□□□□ -0.69
Nedd8P29595 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms