Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Sdc1P18828 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Sdc1P18828 Gm37922-201ENSMUST00000195596 455 ntBASIC9.55□□□□□ -0.88
Sdc1P18828 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Sdc1P18828 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC9.55□□□□□ -0.88
Sdc1P18828 Gm5781-201ENSMUST00000219792 443 ntBASIC9.55□□□□□ -0.88
Sdc1P18828 AC225888.1-201ENSMUST00000227184 728 ntBASIC9.55□□□□□ -0.88
Sdc1P18828 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Sdc1P18828 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC9.55□□□□□ -0.88
Sdc1P18828 Hist1h2al-201ENSMUST00000091708 339 ntBASIC9.55□□□□□ -0.88
Sdc1P18828 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC9.55□□□□□ -0.88
Sdc1P18828 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sdc1P18828 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sdc1P18828 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sdc1P18828 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sdc1P18828 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC9.55□□□□□ -0.88
Sdc1P18828 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC9.55□□□□□ -0.88
Sdc1P18828 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sdc1P18828 Gm37827-201ENSMUST00000194486 1542 ntBASIC9.55□□□□□ -0.88
Sdc1P18828 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sdc1P18828 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sdc1P18828 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sdc1P18828 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sdc1P18828 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sdc1P18828 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC9.55□□□□□ -0.88
Sdc1P18828 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sdc1P18828 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sdc1P18828 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Sdc1P18828 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sdc1P18828 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sdc1P18828 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Sdc1P18828 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Sdc1P18828 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Sdc1P18828 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Sdc1P18828 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC9.54□□□□□ -0.88
Sdc1P18828 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC9.54□□□□□ -0.88
Sdc1P18828 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC9.54□□□□□ -0.88
Sdc1P18828 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sdc1P18828 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sdc1P18828 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sdc1P18828 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sdc1P18828 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sdc1P18828 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sdc1P18828 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sdc1P18828 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sdc1P18828 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sdc1P18828 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Sdc1P18828 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Sdc1P18828 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Sdc1P18828 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sdc1P18828 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sdc1P18828 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sdc1P18828 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sdc1P18828 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sdc1P18828 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sdc1P18828 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Sdc1P18828 Gm38271-201ENSMUST00000192296 1603 ntBASIC9.54□□□□□ -0.88
Sdc1P18828 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sdc1P18828 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC9.54□□□□□ -0.88
Sdc1P18828 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Sdc1P18828 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sdc1P18828 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sdc1P18828 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC9.54□□□□□ -0.88
Sdc1P18828 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC9.54□□□□□ -0.88
Sdc1P18828 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC9.54□□□□□ -0.88
Sdc1P18828 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Sdc1P18828 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sdc1P18828 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sdc1P18828 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Sdc1P18828 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sdc1P18828 Gm38241-201ENSMUST00000192641 898 ntBASIC9.54□□□□□ -0.88
Sdc1P18828 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC9.54□□□□□ -0.88
Sdc1P18828 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC9.54□□□□□ -0.88
Sdc1P18828 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC9.54□□□□□ -0.88
Sdc1P18828 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC9.54□□□□□ -0.88
Sdc1P18828 Gm18165-201ENSMUST00000217426 928 ntBASIC9.54□□□□□ -0.88
Sdc1P18828 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC9.54□□□□□ -0.88
Sdc1P18828 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sdc1P18828 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sdc1P18828 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sdc1P18828 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Sdc1P18828 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC9.54□□□□□ -0.88
Sdc1P18828 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Sdc1P18828 Gm6092-201ENSMUST00000121659 2029 ntBASIC9.54□□□□□ -0.88
Sdc1P18828 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC9.54□□□□□ -0.88
Sdc1P18828 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC9.54□□□□□ -0.88
Sdc1P18828 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Sdc1P18828 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Sdc1P18828 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Sdc1P18828 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sdc1P18828 AC154671.1-201ENSMUST00000228617 1578 ntBASIC9.54□□□□□ -0.88
Sdc1P18828 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sdc1P18828 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Sdc1P18828 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Sdc1P18828 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Sdc1P18828 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sdc1P18828 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Sdc1P18828 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Sdc1P18828 Rims2-204ENSMUST00000226410 3685 ntBASIC9.53□□□□□ -0.88
Sdc1P18828 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms