Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ccl3P10855 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC10.32□□□□□ -0.76
Ccl3P10855 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ccl3P10855 Gm24248-201ENSMUST00000157321 322 ntBASIC10.32□□□□□ -0.76
Ccl3P10855 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Ccl3P10855 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ccl3P10855 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC10.32□□□□□ -0.76
Ccl3P10855 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Ccl3P10855 Gm7082-201ENSMUST00000209880 969 ntBASIC10.32□□□□□ -0.76
Ccl3P10855 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC10.32□□□□□ -0.76
Ccl3P10855 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ccl3P10855 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Ccl3P10855 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ccl3P10855 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ccl3P10855 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Ccl3P10855 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ccl3P10855 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ccl3P10855 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ccl3P10855 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ccl3P10855 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ccl3P10855 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ccl3P10855 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Ccl3P10855 Gm44056-201ENSMUST00000204623 1427 ntBASIC10.32□□□□□ -0.76
Ccl3P10855 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ccl3P10855 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ccl3P10855 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ccl3P10855 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Ccl3P10855 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
Ccl3P10855 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Ccl3P10855 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccl3P10855 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccl3P10855 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccl3P10855 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccl3P10855 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC10.31□□□□□ -0.76
Ccl3P10855 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.31□□□□□ -0.76
Ccl3P10855 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
Ccl3P10855 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ccl3P10855 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC10.31□□□□□ -0.76
Ccl3P10855 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC10.31□□□□□ -0.76
Ccl3P10855 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.31□□□□□ -0.76
Ccl3P10855 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccl3P10855 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.31□□□□□ -0.76
Ccl3P10855 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ccl3P10855 Gm24791-201ENSMUST00000104284 131 ntBASIC10.31□□□□□ -0.76
Ccl3P10855 Gm11560-201ENSMUST00000117567 948 ntBASIC10.31□□□□□ -0.76
Ccl3P10855 Gm16219-201ENSMUST00000120096 274 ntBASIC10.31□□□□□ -0.76
Ccl3P10855 Gm5257-201ENSMUST00000121823 790 ntBASIC10.31□□□□□ -0.76
Ccl3P10855 Gm11960-201ENSMUST00000122068 925 ntBASIC10.31□□□□□ -0.76
Ccl3P10855 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccl3P10855 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccl3P10855 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC10.31□□□□□ -0.76
Ccl3P10855 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC10.31□□□□□ -0.76
Ccl3P10855 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC10.31□□□□□ -0.76
Ccl3P10855 Gm22146-201ENSMUST00000157397 288 ntBASIC10.31□□□□□ -0.76
Ccl3P10855 Gm25554-201ENSMUST00000158075 113 ntBASIC10.31□□□□□ -0.76
Ccl3P10855 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Ccl3P10855 Gm17709-201ENSMUST00000174536 1096 ntBASIC10.31□□□□□ -0.76
Ccl3P10855 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC10.31□□□□□ -0.76
Ccl3P10855 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ccl3P10855 Gm9081-201ENSMUST00000182346 991 ntBASIC10.31□□□□□ -0.76
Ccl3P10855 Gm19015-201ENSMUST00000184002 1189 ntBASIC10.31□□□□□ -0.76
Ccl3P10855 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC10.31□□□□□ -0.76
Ccl3P10855 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.31□□□□□ -0.76
Ccl3P10855 Gm19587-201ENSMUST00000191395 545 ntBASIC10.31□□□□□ -0.76
Ccl3P10855 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ccl3P10855 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC10.31□□□□□ -0.76
Ccl3P10855 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC10.31□□□□□ -0.76
Ccl3P10855 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Ccl3P10855 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Ccl3P10855 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC10.31□□□□□ -0.76
Ccl3P10855 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccl3P10855 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Ccl3P10855 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC10.31□□□□□ -0.76
Ccl3P10855 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccl3P10855 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ccl3P10855 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ccl3P10855 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccl3P10855 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.31□□□□□ -0.76
Ccl3P10855 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccl3P10855 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccl3P10855 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccl3P10855 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Ccl3P10855 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ccl3P10855 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccl3P10855 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccl3P10855 Gm9415-201ENSMUST00000200462 1321 ntBASIC10.31□□□□□ -0.76
Ccl3P10855 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccl3P10855 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.31□□□□□ -0.76
Ccl3P10855 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Ccl3P10855 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC10.3□□□□□ -0.76
Ccl3P10855 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl3P10855 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl3P10855 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC10.3□□□□□ -0.76
Ccl3P10855 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl3P10855 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl3P10855 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl3P10855 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl3P10855 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Ccl3P10855 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl3P10855 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms