Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Chmp6P0C0A3 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Chmp6P0C0A3 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.77□□□□□ -0.36
Chmp6P0C0A3 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Chmp6P0C0A3 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Chmp6P0C0A3 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.77□□□□□ -0.37
Chmp6P0C0A3 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp6P0C0A3 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Chmp6P0C0A3 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.77□□□□□ -0.37
Chmp6P0C0A3 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.77□□□□□ -0.37
Chmp6P0C0A3 Gm12217-201ENSMUST00000118858 696 ntBASIC12.77□□□□□ -0.37
Chmp6P0C0A3 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.77□□□□□ -0.37
Chmp6P0C0A3 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.77□□□□□ -0.37
Chmp6P0C0A3 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp6P0C0A3 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.77□□□□□ -0.37
Chmp6P0C0A3 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp6P0C0A3 Gm18038-201ENSMUST00000197900 485 ntBASIC12.77□□□□□ -0.37
Chmp6P0C0A3 Rps4l-202ENSMUST00000204242 789 ntBASIC12.77□□□□□ -0.37
Chmp6P0C0A3 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp6P0C0A3 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.77□□□□□ -0.37
Chmp6P0C0A3 Gm19208-201ENSMUST00000213861 912 ntBASIC12.77□□□□□ -0.37
Chmp6P0C0A3 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.77□□□□□ -0.37
Chmp6P0C0A3 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp6P0C0A3 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp6P0C0A3 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp6P0C0A3 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp6P0C0A3 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC12.77□□□□□ -0.37
Chmp6P0C0A3 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.77□□□□□ -0.37
Chmp6P0C0A3 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp6P0C0A3 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp6P0C0A3 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.77□□□□□ -0.37
Chmp6P0C0A3 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp6P0C0A3 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Chmp6P0C0A3 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp6P0C0A3 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.77□□□□□ -0.37
Chmp6P0C0A3 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp6P0C0A3 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Chmp6P0C0A3 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.77□□□□□ -0.37
Chmp6P0C0A3 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
Chmp6P0C0A3 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp6P0C0A3 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp6P0C0A3 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.77□□□□□ -0.37
Chmp6P0C0A3 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp6P0C0A3 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp6P0C0A3 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp6P0C0A3 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp6P0C0A3 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp6P0C0A3 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp6P0C0A3 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.76□□□□□ -0.37
Chmp6P0C0A3 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp6P0C0A3 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp6P0C0A3 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp6P0C0A3 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Chmp6P0C0A3 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Chmp6P0C0A3 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.76□□□□□ -0.37
Chmp6P0C0A3 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.76□□□□□ -0.37
Chmp6P0C0A3 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.76□□□□□ -0.37
Chmp6P0C0A3 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Chmp6P0C0A3 Gm28686-201ENSMUST00000187404 609 ntBASIC12.76□□□□□ -0.37
Chmp6P0C0A3 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp6P0C0A3 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Chmp6P0C0A3 Gm4157-201ENSMUST00000211647 679 ntBASIC12.76□□□□□ -0.37
Chmp6P0C0A3 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.76□□□□□ -0.37
Chmp6P0C0A3 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.76□□□□□ -0.37
Chmp6P0C0A3 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Chmp6P0C0A3 Gm26448-201ENSMUST00000082446 203 ntBASIC12.76□□□□□ -0.37
Chmp6P0C0A3 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp6P0C0A3 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Chmp6P0C0A3 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp6P0C0A3 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp6P0C0A3 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp6P0C0A3 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp6P0C0A3 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp6P0C0A3 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.76□□□□□ -0.37
Chmp6P0C0A3 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Chmp6P0C0A3 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.76□□□□□ -0.37
Chmp6P0C0A3 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.76□□□□□ -0.37
Chmp6P0C0A3 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.76□□□□□ -0.37
Chmp6P0C0A3 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp6P0C0A3 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Chmp6P0C0A3 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chmp6P0C0A3 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp6P0C0A3 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp6P0C0A3 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp6P0C0A3 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.75□□□□□ -0.37
Chmp6P0C0A3 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.75□□□□□ -0.37
Chmp6P0C0A3 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Chmp6P0C0A3 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp6P0C0A3 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.75□□□□□ -0.37
Chmp6P0C0A3 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp6P0C0A3 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp6P0C0A3 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp6P0C0A3 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp6P0C0A3 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp6P0C0A3 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp6P0C0A3 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp6P0C0A3 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp6P0C0A3 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.75□□□□□ -0.37
Chmp6P0C0A3 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp6P0C0A3 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms