Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Gm8228-201ENSMUST00000189949 2192 ntBASIC10.28□□□□□ -0.76
P04224 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
P04224 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
P04224 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
P04224 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
P04224 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
P04224 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
P04224 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
P04224 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.28□□□□□ -0.76
P04224 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC10.28□□□□□ -0.76
P04224 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC10.28□□□□□ -0.76
P04224 Gm11597-201ENSMUST00000121423 964 ntBASIC10.28□□□□□ -0.76
P04224 Gm12138-201ENSMUST00000122180 951 ntBASIC10.28□□□□□ -0.76
P04224 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
P04224 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC10.28□□□□□ -0.76
P04224 Gm7029-201ENSMUST00000173226 450 ntBASIC10.28□□□□□ -0.76
P04224 Gm27847-201ENSMUST00000183711 107 ntBASIC10.28□□□□□ -0.76
P04224 Gm27375-201ENSMUST00000183799 107 ntBASIC10.28□□□□□ -0.76
P04224 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC10.28□□□□□ -0.76
P04224 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC10.28□□□□□ -0.76
P04224 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
P04224 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
P04224 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
P04224 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
P04224 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.28□□□□□ -0.76
P04224 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
P04224 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
P04224 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
P04224 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
P04224 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
P04224 Birc6-202ENSMUST00000180037 15768 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
P04224 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
P04224 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
P04224 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
P04224 Asxl2-207ENSMUST00000153102 4462 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
P04224 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
P04224 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
P04224 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
P04224 Bsn-201ENSMUST00000035208 15938 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
P04224 Gm6092-201ENSMUST00000121659 2029 ntBASIC10.28□□□□□ -0.76
P04224 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
P04224 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
P04224 Dysf-215ENSMUST00000204591 6641 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
P04224 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
P04224 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
P04224 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
P04224 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
P04224 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
P04224 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
P04224 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
P04224 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
P04224 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P04224 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC10.27□□□□□ -0.77
P04224 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
P04224 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC10.27□□□□□ -0.77
P04224 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
P04224 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.77
P04224 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P04224 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
P04224 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC10.27□□□□□ -0.77
P04224 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
P04224 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC10.27□□□□□ -0.77
P04224 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.27□□□□□ -0.77
P04224 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.27□□□□□ -0.77
P04224 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
P04224 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
P04224 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
P04224 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
P04224 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC10.27□□□□□ -0.77
P04224 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.77
P04224 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC10.27□□□□□ -0.77
P04224 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P04224 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P04224 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P04224 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
P04224 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
P04224 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P04224 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
P04224 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P04224 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC10.27□□□□□ -0.77
P04224 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
P04224 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P04224 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC10.27□□□□□ -0.77
P04224 Gm3287-205ENSMUST00000228893 1332 ntBASIC10.27□□□□□ -0.77
P04224 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
P04224 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
P04224 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.27□□□□□ -0.77
P04224 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
P04224 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
P04224 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
P04224 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.26□□□□□ -0.77
P04224 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
P04224 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P04224 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
P04224 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
P04224 Tti2-201ENSMUST00000098842 5039 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
P04224 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P04224 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
P04224 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P04224 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms