Protein–RNA interactions for Protein: P04202

Tgfb1, Transforming growth factor beta-1, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfb1P04202 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tgfb1P04202 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tgfb1P04202 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tgfb1P04202 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Tgfb1P04202 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC10.84□□□□□ -0.67
Tgfb1P04202 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tgfb1P04202 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tgfb1P04202 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Tgfb1P04202 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tgfb1P04202 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tgfb1P04202 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
Tgfb1P04202 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tgfb1P04202 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC10.84□□□□□ -0.67
Tgfb1P04202 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Tgfb1P04202 Gm22885-201ENSMUST00000157410 107 ntBASIC10.84□□□□□ -0.67
Tgfb1P04202 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Tgfb1P04202 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC10.84□□□□□ -0.67
Tgfb1P04202 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tgfb1P04202 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tgfb1P04202 Gm28877-201ENSMUST00000191349 604 ntBASIC10.84□□□□□ -0.67
Tgfb1P04202 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC10.84□□□□□ -0.67
Tgfb1P04202 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC10.84□□□□□ -0.67
Tgfb1P04202 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.84□□□□□ -0.67
Tgfb1P04202 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.84□□□□□ -0.67
Tgfb1P04202 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC10.84□□□□□ -0.67
Tgfb1P04202 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC10.84□□□□□ -0.67
Tgfb1P04202 Gm8420-201ENSMUST00000097103 598 ntBASIC10.84□□□□□ -0.67
Tgfb1P04202 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Tgfb1P04202 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tgfb1P04202 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tgfb1P04202 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tgfb1P04202 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tgfb1P04202 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tgfb1P04202 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC10.84□□□□□ -0.67
Tgfb1P04202 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tgfb1P04202 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tgfb1P04202 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tgfb1P04202 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tgfb1P04202 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tgfb1P04202 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tgfb1P04202 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tgfb1P04202 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tgfb1P04202 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tgfb1P04202 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Tgfb1P04202 Gm5525-201ENSMUST00000190438 1312 ntBASIC10.84□□□□□ -0.67
Tgfb1P04202 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Tgfb1P04202 Crry-ps-201ENSMUST00000079090 1309 ntBASIC10.84□□□□□ -0.67
Tgfb1P04202 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC10.83□□□□□ -0.67
Tgfb1P04202 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tgfb1P04202 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tgfb1P04202 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tgfb1P04202 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tgfb1P04202 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Tgfb1P04202 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tgfb1P04202 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tgfb1P04202 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tgfb1P04202 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tgfb1P04202 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tgfb1P04202 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tgfb1P04202 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tgfb1P04202 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tgfb1P04202 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tgfb1P04202 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Tgfb1P04202 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC10.83□□□□□ -0.68
Tgfb1P04202 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Tgfb1P04202 Gm12380-201ENSMUST00000119012 544 ntBASIC10.83□□□□□ -0.68
Tgfb1P04202 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC10.83□□□□□ -0.68
Tgfb1P04202 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tgfb1P04202 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tgfb1P04202 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC10.83□□□□□ -0.68
Tgfb1P04202 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC10.83□□□□□ -0.68
Tgfb1P04202 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tgfb1P04202 Gm25668-201ENSMUST00000157700 129 ntBASIC10.83□□□□□ -0.68
Tgfb1P04202 Gm24749-201ENSMUST00000157838 343 ntBASIC10.83□□□□□ -0.68
Tgfb1P04202 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Tgfb1P04202 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tgfb1P04202 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Tgfb1P04202 Gm28937-201ENSMUST00000185413 695 ntBASIC10.83□□□□□ -0.68
Tgfb1P04202 Gm29400-201ENSMUST00000187208 695 ntBASIC10.83□□□□□ -0.68
Tgfb1P04202 Gm28662-201ENSMUST00000188446 695 ntBASIC10.83□□□□□ -0.68
Tgfb1P04202 Gm18351-201ENSMUST00000188646 883 ntBASIC10.83□□□□□ -0.68
Tgfb1P04202 Gm28251-201ENSMUST00000188835 695 ntBASIC10.83□□□□□ -0.68
Tgfb1P04202 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC10.83□□□□□ -0.68
Tgfb1P04202 Gm37318-201ENSMUST00000194325 695 ntBASIC10.83□□□□□ -0.68
Tgfb1P04202 Gm38117-201ENSMUST00000194653 939 ntBASIC10.83□□□□□ -0.68
Tgfb1P04202 Gm38017-201ENSMUST00000194768 695 ntBASIC10.83□□□□□ -0.68
Tgfb1P04202 Gm37287-201ENSMUST00000195449 695 ntBASIC10.83□□□□□ -0.68
Tgfb1P04202 Gm37793-201ENSMUST00000195548 695 ntBASIC10.83□□□□□ -0.68
Tgfb1P04202 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.83□□□□□ -0.68
Tgfb1P04202 Gm6450-201ENSMUST00000200896 574 ntBASIC10.83□□□□□ -0.68
Tgfb1P04202 Gm4157-201ENSMUST00000211647 679 ntBASIC10.83□□□□□ -0.68
Tgfb1P04202 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tgfb1P04202 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Tgfb1P04202 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tgfb1P04202 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Tgfb1P04202 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tgfb1P04202 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tgfb1P04202 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tgfb1P04202 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tgfb1P04202 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms