Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC8.55□□□□□ -1.04
TcraP01849 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
TcraP01849 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
TcraP01849 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
TcraP01849 Gm14608-201ENSMUST00000120030 1553 ntBASIC8.55□□□□□ -1.04
TcraP01849 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
TcraP01849 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
TcraP01849 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
TcraP01849 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
TcraP01849 Spata33-207ENSMUST00000212760 4074 ntBASIC8.55□□□□□ -1.04
TcraP01849 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC8.55□□□□□ -1.04
TcraP01849 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
TcraP01849 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC8.55□□□□□ -1.04
TcraP01849 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
TcraP01849 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
TcraP01849 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
TcraP01849 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
TcraP01849 Gm45206-201ENSMUST00000206885 2285 ntBASIC8.55□□□□□ -1.04
TcraP01849 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
TcraP01849 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC8.55□□□□□ -1.04
TcraP01849 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
TcraP01849 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
TcraP01849 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
TcraP01849 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC8.55□□□□□ -1.04
TcraP01849 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC8.55□□□□□ -1.04
TcraP01849 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
TcraP01849 Gm13050-201ENSMUST00000122149 1345 ntBASIC8.54□□□□□ -1.04
TcraP01849 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
TcraP01849 Gm5912-201ENSMUST00000122282 1438 ntBASIC8.54□□□□□ -1.04
TcraP01849 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
TcraP01849 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC8.54□□□□□ -1.04
TcraP01849 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC8.54□□□□□ -1.04
TcraP01849 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
TcraP01849 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC8.54□□□□□ -1.04
TcraP01849 Gm43823-201ENSMUST00000197391 1808 ntBASIC8.54□□□□□ -1.04
TcraP01849 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
TcraP01849 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC8.54□□□□□ -1.04
TcraP01849 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
TcraP01849 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TcraP01849 Eif2ak4-201ENSMUST00000005233 5212 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TcraP01849 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TcraP01849 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
TcraP01849 Aen-203ENSMUST00000107425 4956 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
TcraP01849 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TcraP01849 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TcraP01849 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
TcraP01849 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
TcraP01849 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TcraP01849 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TcraP01849 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TcraP01849 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TcraP01849 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC8.54□□□□□ -1.04
TcraP01849 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
TcraP01849 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
TcraP01849 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
TcraP01849 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC8.54□□□□□ -1.04
TcraP01849 Gm11478-201ENSMUST00000117851 599 ntBASIC8.54□□□□□ -1.04
TcraP01849 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC8.54□□□□□ -1.04
TcraP01849 Gm12203-201ENSMUST00000118235 598 ntBASIC8.54□□□□□ -1.04
TcraP01849 Gm12209-201ENSMUST00000120089 596 ntBASIC8.54□□□□□ -1.04
TcraP01849 Gm10156-201ENSMUST00000122364 462 ntBASIC8.54□□□□□ -1.04
TcraP01849 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC8.54□□□□□ -1.04
TcraP01849 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TcraP01849 Gm8810-201ENSMUST00000172895 754 ntBASIC8.54□□□□□ -1.04
TcraP01849 Gm22121-201ENSMUST00000175148 54 ntBASIC8.54□□□□□ -1.04
TcraP01849 Gm9794-201ENSMUST00000202370 423 ntBASIC8.54□□□□□ -1.04
TcraP01849 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
TcraP01849 Gm45059-201ENSMUST00000205558 1077 ntBASIC8.54□□□□□ -1.04
TcraP01849 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TcraP01849 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TcraP01849 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TcraP01849 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
TcraP01849 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
TcraP01849 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TcraP01849 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TcraP01849 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TcraP01849 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TcraP01849 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TcraP01849 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
TcraP01849 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
TcraP01849 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TcraP01849 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
TcraP01849 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
TcraP01849 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TcraP01849 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
TcraP01849 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
TcraP01849 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC8.54□□□□□ -1.04
TcraP01849 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
TcraP01849 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TcraP01849 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC8.54□□□□□ -1.04
TcraP01849 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
TcraP01849 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
TcraP01849 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TcraP01849 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC8.54□□□□□ -1.04
TcraP01849 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
TcraP01849 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC8.53□□□□□ -1.04
TcraP01849 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
TcraP01849 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
TcraP01849 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
TcraP01849 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC8.53□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms