Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Gm5852-201ENSMUST00000194119 1021 ntBASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 AC133602.1-201ENSMUST00000227510 509 ntBASIC10.1□□□□□ -0.79
Igh-VJ558P01758 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Mypopos-202ENSMUST00000205975 2321 ntBASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC10.1□□□□□ -0.79
Igh-VJ558P01758 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Gm9129-201ENSMUST00000218173 1689 ntBASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Gm44573-201ENSMUST00000191753 2370 ntBASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Gm25881-201ENSMUST00000157783 103 ntBASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Gm3329-201ENSMUST00000159873 556 ntBASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Gm10807-201ENSMUST00000177134 795 ntBASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Gm38151-201ENSMUST00000195085 289 ntBASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Gm2965-201ENSMUST00000198365 343 ntBASIC10.09□□□□□ -0.79
Igh-VJ558P01758 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Gm45575-201ENSMUST00000210283 548 ntBASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 AC154171.1-201ENSMUST00000224610 643 ntBASIC10.09□□□□□ -0.79
Igh-VJ558P01758 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC10.09□□□□□ -0.79
Igh-VJ558P01758 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igh-VJ558P01758 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Igh-VJ558P01758 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igh-VJ558P01758 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igh-VJ558P01758 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igh-VJ558P01758 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igh-VJ558P01758 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Igh-VJ558P01758 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igh-VJ558P01758 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Igh-VJ558P01758 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igh-VJ558P01758 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms