Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Pdlim1O70400 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim1O70400 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.61□□□□□ -0.55
Pdlim1O70400 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim1O70400 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Pdlim1O70400 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim1O70400 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim1O70400 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim1O70400 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.61□□□□□ -0.55
Pdlim1O70400 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim1O70400 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim1O70400 Gm13916-201ENSMUST00000117368 628 ntBASIC11.61□□□□□ -0.55
Pdlim1O70400 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.61□□□□□ -0.55
Pdlim1O70400 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.61□□□□□ -0.55
Pdlim1O70400 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.61□□□□□ -0.55
Pdlim1O70400 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim1O70400 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.61□□□□□ -0.55
Pdlim1O70400 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.61□□□□□ -0.55
Pdlim1O70400 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.61□□□□□ -0.55
Pdlim1O70400 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Pdlim1O70400 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.61□□□□□ -0.55
Pdlim1O70400 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim1O70400 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim1O70400 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim1O70400 Ntng1-201ENSMUST00000051253 327 ntBASIC11.61□□□□□ -0.55
Pdlim1O70400 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Pdlim1O70400 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim1O70400 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.61□□□□□ -0.55
Pdlim1O70400 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim1O70400 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Pdlim1O70400 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Pdlim1O70400 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim1O70400 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim1O70400 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim1O70400 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.6□□□□□ -0.55
Pdlim1O70400 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim1O70400 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim1O70400 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim1O70400 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim1O70400 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim1O70400 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim1O70400 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim1O70400 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim1O70400 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Pdlim1O70400 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Pdlim1O70400 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim1O70400 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim1O70400 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.6□□□□□ -0.55
Pdlim1O70400 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim1O70400 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim1O70400 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Pdlim1O70400 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Pdlim1O70400 Gm13809-201ENSMUST00000117921 597 ntBASIC11.6□□□□□ -0.55
Pdlim1O70400 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.6□□□□□ -0.55
Pdlim1O70400 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim1O70400 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Pdlim1O70400 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Pdlim1O70400 Gm29499-201ENSMUST00000189151 486 ntBASIC11.6□□□□□ -0.55
Pdlim1O70400 Gm28329-201ENSMUST00000191208 689 ntBASIC11.6□□□□□ -0.55
Pdlim1O70400 Gm29171-201ENSMUST00000191397 486 ntBASIC11.6□□□□□ -0.55
Pdlim1O70400 Gm45113-201ENSMUST00000207518 165 ntBASIC11.6□□□□□ -0.55
Pdlim1O70400 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.6□□□□□ -0.55
Pdlim1O70400 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Pdlim1O70400 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim1O70400 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim1O70400 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim1O70400 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim1O70400 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.6□□□□□ -0.55
Pdlim1O70400 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Pdlim1O70400 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim1O70400 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim1O70400 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.6□□□□□ -0.55
Pdlim1O70400 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim1O70400 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim1O70400 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim1O70400 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim1O70400 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim1O70400 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim1O70400 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim1O70400 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim1O70400 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Pdlim1O70400 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim1O70400 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Pdlim1O70400 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Pdlim1O70400 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.59□□□□□ -0.55
Pdlim1O70400 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Pdlim1O70400 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.59□□□□□ -0.55
Pdlim1O70400 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim1O70400 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Pdlim1O70400 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim1O70400 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim1O70400 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Pdlim1O70400 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim1O70400 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim1O70400 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim1O70400 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim1O70400 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim1O70400 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.59□□□□□ -0.55
Pdlim1O70400 Gm11500-201ENSMUST00000118237 601 ntBASIC11.59□□□□□ -0.55
Pdlim1O70400 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms