Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Srp54bE9PXC0 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Srp54bE9PXC0 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Srp54bE9PXC0 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srp54bE9PXC0 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Gm16071-201ENSMUST00000119589 793 ntBASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Gm15782-201ENSMUST00000121073 445 ntBASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Gm22138-201ENSMUST00000158748 128 ntBASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Gm18367-201ENSMUST00000176139 600 ntBASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Srp54bE9PXC0 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Gm9192-201ENSMUST00000183221 985 ntBASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Gm17826-201ENSMUST00000189720 798 ntBASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Gm7600-201ENSMUST00000209657 785 ntBASIC11.59□□□□□ -0.55
Srp54bE9PXC0 CT485606.1-201ENSMUST00000213187 878 ntBASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Gm10752-201ENSMUST00000218348 729 ntBASIC11.59□□□□□ -0.55
Srp54bE9PXC0 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Srp54bE9PXC0 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Srp54bE9PXC0 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Srp54bE9PXC0 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Srp54bE9PXC0 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Srp54bE9PXC0 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Srp54bE9PXC0 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Srp54bE9PXC0 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Srp54bE9PXC0 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.58□□□□□ -0.56
Srp54bE9PXC0 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Srp54bE9PXC0 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Srp54bE9PXC0 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Srp54bE9PXC0 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.58□□□□□ -0.56
Srp54bE9PXC0 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.58□□□□□ -0.56
Srp54bE9PXC0 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Srp54bE9PXC0 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Srp54bE9PXC0 Gm11451-201ENSMUST00000118946 630 ntBASIC11.58□□□□□ -0.56
Srp54bE9PXC0 Gm1848-201ENSMUST00000120711 789 ntBASIC11.58□□□□□ -0.56
Srp54bE9PXC0 Gm7150-201ENSMUST00000122032 981 ntBASIC11.58□□□□□ -0.56
Srp54bE9PXC0 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC11.58□□□□□ -0.56
Srp54bE9PXC0 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Srp54bE9PXC0 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Srp54bE9PXC0 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.58□□□□□ -0.56
Srp54bE9PXC0 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC11.58□□□□□ -0.56
Srp54bE9PXC0 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.58□□□□□ -0.56
Srp54bE9PXC0 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Srp54bE9PXC0 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Srp54bE9PXC0 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.58□□□□□ -0.56
Srp54bE9PXC0 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Srp54bE9PXC0 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Srp54bE9PXC0 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Srp54bE9PXC0 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.58□□□□□ -0.56
Srp54bE9PXC0 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.58□□□□□ -0.56
Srp54bE9PXC0 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Srp54bE9PXC0 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Srp54bE9PXC0 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Srp54bE9PXC0 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Srp54bE9PXC0 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Srp54bE9PXC0 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Srp54bE9PXC0 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
Srp54bE9PXC0 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms