Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd3B1AR17 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Chd3B1AR17 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd3B1AR17 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd3B1AR17 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd3B1AR17 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC11.47□□□□□ -0.57
Chd3B1AR17 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC11.47□□□□□ -0.57
Chd3B1AR17 Gm16071-201ENSMUST00000119589 793 ntBASIC11.47□□□□□ -0.57
Chd3B1AR17 Gm14395-201ENSMUST00000120494 563 ntBASIC11.47□□□□□ -0.57
Chd3B1AR17 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC11.47□□□□□ -0.57
Chd3B1AR17 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chd3B1AR17 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Chd3B1AR17 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC11.47□□□□□ -0.57
Chd3B1AR17 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chd3B1AR17 Gm17826-201ENSMUST00000189720 798 ntBASIC11.47□□□□□ -0.57
Chd3B1AR17 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.47□□□□□ -0.57
Chd3B1AR17 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.47□□□□□ -0.57
Chd3B1AR17 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Chd3B1AR17 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.47□□□□□ -0.57
Chd3B1AR17 Gm7940-201ENSMUST00000218195 769 ntBASIC11.47□□□□□ -0.57
Chd3B1AR17 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Chd3B1AR17 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chd3B1AR17 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chd3B1AR17 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Chd3B1AR17 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Chd3B1AR17 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Chd3B1AR17 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd3B1AR17 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Chd3B1AR17 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.47□□□□□ -0.57
Chd3B1AR17 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd3B1AR17 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd3B1AR17 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd3B1AR17 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd3B1AR17 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd3B1AR17 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd3B1AR17 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Chd3B1AR17 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chd3B1AR17 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd3B1AR17 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd3B1AR17 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Chd3B1AR17 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd3B1AR17 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd3B1AR17 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.47□□□□□ -0.57
Chd3B1AR17 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd3B1AR17 Gm11422-201ENSMUST00000118925 1103 ntBASIC11.47□□□□□ -0.57
Chd3B1AR17 Gm12856-201ENSMUST00000119471 1293 ntBASIC11.47□□□□□ -0.57
Chd3B1AR17 Gm14665-201ENSMUST00000122294 557 ntBASIC11.47□□□□□ -0.57
Chd3B1AR17 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chd3B1AR17 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.47□□□□□ -0.57
Chd3B1AR17 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC11.47□□□□□ -0.57
Chd3B1AR17 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC11.47□□□□□ -0.57
Chd3B1AR17 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.47□□□□□ -0.57
Chd3B1AR17 Gm9463-201ENSMUST00000206707 601 ntBASIC11.47□□□□□ -0.57
Chd3B1AR17 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC11.47□□□□□ -0.57
Chd3B1AR17 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Chd3B1AR17 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chd3B1AR17 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd3B1AR17 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd3B1AR17 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd3B1AR17 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chd3B1AR17 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Chd3B1AR17 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chd3B1AR17 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.46□□□□□ -0.57
Chd3B1AR17 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chd3B1AR17 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chd3B1AR17 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chd3B1AR17 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chd3B1AR17 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chd3B1AR17 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chd3B1AR17 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
Chd3B1AR17 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chd3B1AR17 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Chd3B1AR17 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Chd3B1AR17 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chd3B1AR17 Gm24891-201ENSMUST00000104391 136 ntBASIC11.46□□□□□ -0.57
Chd3B1AR17 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Chd3B1AR17 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC11.46□□□□□ -0.57
Chd3B1AR17 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.46□□□□□ -0.57
Chd3B1AR17 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.46□□□□□ -0.57
Chd3B1AR17 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chd3B1AR17 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.46□□□□□ -0.57
Chd3B1AR17 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.46□□□□□ -0.57
Chd3B1AR17 AC124433.1-201ENSMUST00000224483 1063 ntBASIC11.46□□□□□ -0.57
Chd3B1AR17 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
Chd3B1AR17 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Chd3B1AR17 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chd3B1AR17 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.46□□□□□ -0.58
Chd3B1AR17 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Chd3B1AR17 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chd3B1AR17 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Chd3B1AR17 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chd3B1AR17 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chd3B1AR17 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chd3B1AR17 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chd3B1AR17 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.46□□□□□ -0.58
Chd3B1AR17 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chd3B1AR17 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd3B1AR17 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Chd3B1AR17 Gm25076-201ENSMUST00000104098 132 ntBASIC11.45□□□□□ -0.58
Chd3B1AR17 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms