Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ubr4A2AN08 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ubr4A2AN08 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ubr4A2AN08 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ubr4A2AN08 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ubr4A2AN08 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ubr4A2AN08 Gm13215-201ENSMUST00000117559 472 ntBASIC5.99□□□□□ -1.45
Ubr4A2AN08 Gm15650-201ENSMUST00000135451 770 ntTSL 3 BASIC5.99□□□□□ -1.45
Ubr4A2AN08 Gm18862-201ENSMUST00000204643 933 ntBASIC5.99□□□□□ -1.45
Ubr4A2AN08 AC118476.4-201ENSMUST00000215385 790 ntTSL 5 BASIC5.99□□□□□ -1.45
Ubr4A2AN08 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ubr4A2AN08 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ubr4A2AN08 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ubr4A2AN08 Gm5533-201ENSMUST00000070987 1343 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ubr4A2AN08 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ubr4A2AN08 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ubr4A2AN08 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Ubr4A2AN08 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ubr4A2AN08 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ubr4A2AN08 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Ubr4A2AN08 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Ubr4A2AN08 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ubr4A2AN08 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Ubr4A2AN08 Gm14108-201ENSMUST00000122234 494 ntBASIC5.99□□□□□ -1.45
Ubr4A2AN08 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ubr4A2AN08 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ubr4A2AN08 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ubr4A2AN08 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ubr4A2AN08 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC5.99□□□□□ -1.45
Ubr4A2AN08 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ubr4A2AN08 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ubr4A2AN08 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ubr4A2AN08 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ubr4A2AN08 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC5.99□□□□□ -1.45
Ubr4A2AN08 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ubr4A2AN08 Gm26913-201ENSMUST00000182391 732 ntBASIC5.99□□□□□ -1.45
Ubr4A2AN08 Tmem265-202ENSMUST00000190278 587 ntTSL 3 BASIC5.99□□□□□ -1.45
Ubr4A2AN08 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ubr4A2AN08 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ubr4A2AN08 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ubr4A2AN08 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ubr4A2AN08 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ubr4A2AN08 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Ubr4A2AN08 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Gm12362-201ENSMUST00000121986 342 ntBASIC5.98□□□□□ -1.45
Ubr4A2AN08 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Gm7997-201ENSMUST00000210546 980 ntBASIC5.98□□□□□ -1.45
Ubr4A2AN08 CT030166.5-201ENSMUST00000222249 420 ntBASIC5.98□□□□□ -1.45
Ubr4A2AN08 Gm10238-201ENSMUST00000089689 408 ntBASIC5.98□□□□□ -1.45
Ubr4A2AN08 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 A530006G24Rik-201ENSMUST00000152542 1331 ntTSL 2 BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Myo1h-209ENSMUST00000199567 1307 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Gm12626-201ENSMUST00000117339 1983 ntBASIC5.98□□□□□ -1.45
Ubr4A2AN08 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Hbq1b-201ENSMUST00000101387 562 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC5.98□□□□□ -1.45
Ubr4A2AN08 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Gm6633-201ENSMUST00000173851 270 ntBASIC5.98□□□□□ -1.45
Ubr4A2AN08 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 D7Ertd128e-201ENSMUST00000189744 928 ntTSL 2 BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Gm37559-201ENSMUST00000193556 832 ntBASIC5.98□□□□□ -1.45
Ubr4A2AN08 Pf4-203ENSMUST00000202625 411 ntTSL 2 BASIC5.98□□□□□ -1.45
Ubr4A2AN08 4930428N03Rik-205ENSMUST00000225654 892 ntBASIC5.98□□□□□ -1.45
Ubr4A2AN08 Mettl7b-201ENSMUST00000026398 1230 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 AC129931.1-201ENSMUST00000228865 1861 ntBASIC5.98□□□□□ -1.45
Ubr4A2AN08 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Fam216b-202ENSMUST00000118785 1447 ntTSL 5 BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Gm6721-201ENSMUST00000218353 1445 ntBASIC5.98□□□□□ -1.45
Ubr4A2AN08 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Ubr4A2AN08 Gm12463-201ENSMUST00000118271 849 ntBASIC5.98□□□□□ -1.45
Ubr4A2AN08 Gm8661-201ENSMUST00000118688 992 ntBASIC5.98□□□□□ -1.45
Ubr4A2AN08 Mir6239-201ENSMUST00000183564 105 ntBASIC5.98□□□□□ -1.45
Ubr4A2AN08 BC060293-201ENSMUST00000207005 1104 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms