Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.58□□□□□ -0.72
H2afb3S4R1G7 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb3S4R1G7 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb3S4R1G7 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb3S4R1G7 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb3S4R1G7 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb3S4R1G7 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb3S4R1G7 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Gm42498-201ENSMUST00000199981 1372 ntBASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Gm45496-201ENSMUST00000209918 2917 ntBASIC10.57□□□□□ -0.72
H2afb3S4R1G7 BC043934-202ENSMUST00000185694 2356 ntBASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Gm12015-201ENSMUST00000117065 843 ntBASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Gm11700-201ENSMUST00000119409 403 ntBASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Gm12164-201ENSMUST00000121695 551 ntBASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 AC153962.4-201ENSMUST00000217878 242 ntBASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Gm8712-201ENSMUST00000221090 701 ntBASIC10.57□□□□□ -0.72
H2afb3S4R1G7 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Gm9823-201ENSMUST00000051212 327 ntBASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC10.57□□□□□ -0.72
H2afb3S4R1G7 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afb3S4R1G7 Btrc-209ENSMUST00000224478 2194 ntBASIC10.56□□□□□ -0.72
H2afb3S4R1G7 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afb3S4R1G7 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afb3S4R1G7 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.56□□□□□ -0.72
H2afb3S4R1G7 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.56□□□□□ -0.72
H2afb3S4R1G7 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afb3S4R1G7 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afb3S4R1G7 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
H2afb3S4R1G7 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afb3S4R1G7 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
H2afb3S4R1G7 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
H2afb3S4R1G7 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
H2afb3S4R1G7 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afb3S4R1G7 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afb3S4R1G7 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
H2afb3S4R1G7 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afb3S4R1G7 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afb3S4R1G7 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afb3S4R1G7 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afb3S4R1G7 Gm12241-201ENSMUST00000118330 726 ntBASIC10.56□□□□□ -0.72
H2afb3S4R1G7 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
H2afb3S4R1G7 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC10.56□□□□□ -0.72
H2afb3S4R1G7 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
H2afb3S4R1G7 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.56□□□□□ -0.72
H2afb3S4R1G7 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
H2afb3S4R1G7 Gm31256-201ENSMUST00000194705 506 ntBASIC10.56□□□□□ -0.72
H2afb3S4R1G7 Gm18893-201ENSMUST00000198416 943 ntBASIC10.56□□□□□ -0.72
H2afb3S4R1G7 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
H2afb3S4R1G7 Gm18054-201ENSMUST00000207539 555 ntBASIC10.56□□□□□ -0.72
H2afb3S4R1G7 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afb3S4R1G7 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
H2afb3S4R1G7 Gm25857-201ENSMUST00000082788 129 ntBASIC10.56□□□□□ -0.72
H2afb3S4R1G7 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC10.56□□□□□ -0.72
H2afb3S4R1G7 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
H2afb3S4R1G7 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms