Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 Gm14005-209ENSMUST00000224993 1832 ntBASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 Gm2546-201ENSMUST00000182630 991 ntBASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 Gm42627-201ENSMUST00000197347 224 ntBASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 Gm35850-202ENSMUST00000211705 2120 ntBASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk1bQ9Z2C6 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.67
Upk1bQ9Z2C6 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Auts2-212ENSMUST00000178555 309 ntBASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Gm38230-201ENSMUST00000193572 1159 ntBASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Gm9299-201ENSMUST00000206392 1140 ntBASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Gm9004-201ENSMUST00000218739 1222 ntBASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Gm4780-202ENSMUST00000215200 2644 ntBASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk1bQ9Z2C6 Gm9035-201ENSMUST00000218318 1697 ntBASIC10.82□□□□□ -0.68
Upk1bQ9Z2C6 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Upk1bQ9Z2C6 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms