Protein–RNA interactions for Protein: Q9ESF1

Otof, Otoferlin, mousemouse

Predictions only

Length 1,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtofQ9ESF1 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
OtofQ9ESF1 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
OtofQ9ESF1 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
OtofQ9ESF1 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
OtofQ9ESF1 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
OtofQ9ESF1 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
OtofQ9ESF1 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
OtofQ9ESF1 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
OtofQ9ESF1 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
OtofQ9ESF1 Gm21759-201ENSMUST00000178345 1828 ntBASIC11.58□□□□□ -0.56
OtofQ9ESF1 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
OtofQ9ESF1 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
OtofQ9ESF1 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC11.58□□□□□ -0.56
OtofQ9ESF1 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.58□□□□□ -0.56
OtofQ9ESF1 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
OtofQ9ESF1 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
OtofQ9ESF1 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
OtofQ9ESF1 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
OtofQ9ESF1 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC11.58□□□□□ -0.56
OtofQ9ESF1 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.58□□□□□ -0.56
OtofQ9ESF1 Gm24398-201ENSMUST00000157870 109 ntBASIC11.58□□□□□ -0.56
OtofQ9ESF1 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
OtofQ9ESF1 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
OtofQ9ESF1 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.57□□□□□ -0.56
OtofQ9ESF1 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
OtofQ9ESF1 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
OtofQ9ESF1 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
OtofQ9ESF1 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.57□□□□□ -0.56
OtofQ9ESF1 Gm9415-201ENSMUST00000200462 1321 ntBASIC11.57□□□□□ -0.56
OtofQ9ESF1 Gm6655-201ENSMUST00000201932 1309 ntBASIC11.57□□□□□ -0.56
OtofQ9ESF1 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
OtofQ9ESF1 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
OtofQ9ESF1 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
OtofQ9ESF1 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
OtofQ9ESF1 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
OtofQ9ESF1 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
OtofQ9ESF1 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.57□□□□□ -0.56
OtofQ9ESF1 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
OtofQ9ESF1 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
OtofQ9ESF1 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
OtofQ9ESF1 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
OtofQ9ESF1 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC11.57□□□□□ -0.56
OtofQ9ESF1 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC11.57□□□□□ -0.56
OtofQ9ESF1 Gm6407-201ENSMUST00000176468 549 ntBASIC11.57□□□□□ -0.56
OtofQ9ESF1 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
OtofQ9ESF1 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
OtofQ9ESF1 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
OtofQ9ESF1 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
OtofQ9ESF1 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
OtofQ9ESF1 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
OtofQ9ESF1 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
OtofQ9ESF1 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
OtofQ9ESF1 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
OtofQ9ESF1 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.57□□□□□ -0.56
OtofQ9ESF1 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
OtofQ9ESF1 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
OtofQ9ESF1 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
OtofQ9ESF1 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
OtofQ9ESF1 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.57□□□□□ -0.56
OtofQ9ESF1 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
OtofQ9ESF1 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.56□□□□□ -0.56
OtofQ9ESF1 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
OtofQ9ESF1 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
OtofQ9ESF1 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
OtofQ9ESF1 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
OtofQ9ESF1 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
OtofQ9ESF1 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
OtofQ9ESF1 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
OtofQ9ESF1 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC11.56□□□□□ -0.56
OtofQ9ESF1 Gm25492-201ENSMUST00000157383 129 ntBASIC11.56□□□□□ -0.56
OtofQ9ESF1 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
OtofQ9ESF1 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
OtofQ9ESF1 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC11.56□□□□□ -0.56
OtofQ9ESF1 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
OtofQ9ESF1 Ap3s1-202ENSMUST00000224622 978 ntBASIC11.56□□□□□ -0.56
OtofQ9ESF1 AC154589.2-201ENSMUST00000228847 251 ntBASIC11.56□□□□□ -0.56
OtofQ9ESF1 Gm9873-201ENSMUST00000063891 1097 ntBASIC11.56□□□□□ -0.56
OtofQ9ESF1 Gm23680-201ENSMUST00000083162 164 ntBASIC11.56□□□□□ -0.56
OtofQ9ESF1 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
OtofQ9ESF1 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
OtofQ9ESF1 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
OtofQ9ESF1 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
OtofQ9ESF1 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
OtofQ9ESF1 Paupar-201ENSMUST00000194826 3482 ntBASIC11.56□□□□□ -0.56
OtofQ9ESF1 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
OtofQ9ESF1 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.56□□□□□ -0.56
OtofQ9ESF1 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
OtofQ9ESF1 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
OtofQ9ESF1 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
OtofQ9ESF1 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
OtofQ9ESF1 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
OtofQ9ESF1 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
OtofQ9ESF1 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
OtofQ9ESF1 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
OtofQ9ESF1 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
OtofQ9ESF1 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
OtofQ9ESF1 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
OtofQ9ESF1 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.56□□□□□ -0.56
OtofQ9ESF1 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
OtofQ9ESF1 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms