Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Gm43002-201ENSMUST00000200310 155 ntBASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Gm8320-201ENSMUST00000177584 1762 ntBASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Gm8303-201ENSMUST00000178371 1762 ntBASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Gm8331-201ENSMUST00000178433 1762 ntBASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Gm13127-201ENSMUST00000118978 1389 ntBASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ube4bQ9ES00 CT009713.5-203ENSMUST00000224218 2079 ntBASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.24□□□□□ -0.61
Ube4bQ9ES00 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ube4bQ9ES00 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Gm13369-201ENSMUST00000119442 987 ntBASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Gm16479-201ENSMUST00000121706 932 ntBASIC11.24□□□□□ -0.61
Ube4bQ9ES00 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Rmrp-201ENSMUST00000157463 271 ntBASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Gm22331-201ENSMUST00000158066 136 ntBASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Gm23363-201ENSMUST00000175024 79 ntBASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Gm27847-201ENSMUST00000183711 107 ntBASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Gm27375-201ENSMUST00000183799 107 ntBASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Gm37042-201ENSMUST00000193816 581 ntBASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ube4bQ9ES00 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ube4bQ9ES00 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms