Protein–RNA interactions for Protein: Q9DCN7

Rnft1, E3 ubiquitin-protein ligase RNFT1, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1Q9DCN7 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Erich3-203ENSMUST00000189969 3460 ntBASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Gm38002-201ENSMUST00000193255 180 ntBASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Gm8956-201ENSMUST00000203939 825 ntBASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Gm7046-201ENSMUST00000221351 977 ntBASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnft1Q9DCN7 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnft1Q9DCN7 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rnft1Q9DCN7 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Rnft1Q9DCN7 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Rnft1Q9DCN7 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnft1Q9DCN7 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.42□□□□□ -0.58
Rnft1Q9DCN7 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Rnft1Q9DCN7 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnft1Q9DCN7 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnft1Q9DCN7 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnft1Q9DCN7 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnft1Q9DCN7 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnft1Q9DCN7 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnft1Q9DCN7 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
Rnft1Q9DCN7 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnft1Q9DCN7 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnft1Q9DCN7 Gm12015-201ENSMUST00000117065 843 ntBASIC11.42□□□□□ -0.58
Rnft1Q9DCN7 Gm13297-201ENSMUST00000120205 934 ntBASIC11.42□□□□□ -0.58
Rnft1Q9DCN7 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rnft1Q9DCN7 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.42□□□□□ -0.58
Rnft1Q9DCN7 Snora78-201ENSMUST00000158630 128 ntBASIC11.42□□□□□ -0.58
Rnft1Q9DCN7 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rnft1Q9DCN7 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rnft1Q9DCN7 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.42□□□□□ -0.58
Rnft1Q9DCN7 Gm8712-201ENSMUST00000221090 701 ntBASIC11.42□□□□□ -0.58
Rnft1Q9DCN7 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnft1Q9DCN7 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnft1Q9DCN7 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnft1Q9DCN7 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnft1Q9DCN7 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnft1Q9DCN7 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnft1Q9DCN7 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.42□□□□□ -0.58
Rnft1Q9DCN7 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.42□□□□□ -0.58
Rnft1Q9DCN7 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rnft1Q9DCN7 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rnft1Q9DCN7 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rnft1Q9DCN7 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.42□□□□□ -0.58
Rnft1Q9DCN7 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Rnft1Q9DCN7 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Rnft1Q9DCN7 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Rnft1Q9DCN7 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnft1Q9DCN7 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnft1Q9DCN7 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rnft1Q9DCN7 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms