Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdc40Q9DC48 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdc40Q9DC48 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdc40Q9DC48 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdc40Q9DC48 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Cdc40Q9DC48 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdc40Q9DC48 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdc40Q9DC48 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdc40Q9DC48 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdc40Q9DC48 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdc40Q9DC48 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdc40Q9DC48 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdc40Q9DC48 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Cdc40Q9DC48 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Cdc40Q9DC48 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdc40Q9DC48 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdc40Q9DC48 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
Cdc40Q9DC48 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdc40Q9DC48 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Cdc40Q9DC48 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdc40Q9DC48 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdc40Q9DC48 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cdc40Q9DC48 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdc40Q9DC48 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Cdc40Q9DC48 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Cdc40Q9DC48 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdc40Q9DC48 Gm14058-201ENSMUST00000116082 735 ntBASIC10.93□□□□□ -0.66
Cdc40Q9DC48 Gm12501-201ENSMUST00000119163 529 ntBASIC10.93□□□□□ -0.66
Cdc40Q9DC48 Gm15432-201ENSMUST00000121106 195 ntBASIC10.93□□□□□ -0.66
Cdc40Q9DC48 Gm11450-201ENSMUST00000121144 333 ntBASIC10.93□□□□□ -0.66
Cdc40Q9DC48 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC10.93□□□□□ -0.66
Cdc40Q9DC48 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Cdc40Q9DC48 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cdc40Q9DC48 Gm8546-201ENSMUST00000178288 1264 ntBASIC10.93□□□□□ -0.66
Cdc40Q9DC48 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cdc40Q9DC48 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC10.93□□□□□ -0.66
Cdc40Q9DC48 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC10.93□□□□□ -0.66
Cdc40Q9DC48 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.93□□□□□ -0.66
Cdc40Q9DC48 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.93□□□□□ -0.66
Cdc40Q9DC48 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdc40Q9DC48 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdc40Q9DC48 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdc40Q9DC48 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdc40Q9DC48 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdc40Q9DC48 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cdc40Q9DC48 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Cdc40Q9DC48 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC10.93□□□□□ -0.66
Cdc40Q9DC48 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdc40Q9DC48 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Cdc40Q9DC48 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdc40Q9DC48 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdc40Q9DC48 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdc40Q9DC48 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdc40Q9DC48 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdc40Q9DC48 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Cdc40Q9DC48 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdc40Q9DC48 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC10.93□□□□□ -0.66
Cdc40Q9DC48 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdc40Q9DC48 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdc40Q9DC48 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC10.92□□□□□ -0.66
Cdc40Q9DC48 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.92□□□□□ -0.66
Cdc40Q9DC48 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdc40Q9DC48 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdc40Q9DC48 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdc40Q9DC48 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Cdc40Q9DC48 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdc40Q9DC48 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC10.92□□□□□ -0.66
Cdc40Q9DC48 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdc40Q9DC48 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdc40Q9DC48 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdc40Q9DC48 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC10.92□□□□□ -0.66
Cdc40Q9DC48 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC10.92□□□□□ -0.66
Cdc40Q9DC48 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdc40Q9DC48 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC10.92□□□□□ -0.66
Cdc40Q9DC48 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdc40Q9DC48 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdc40Q9DC48 Gm9555-201ENSMUST00000200908 583 ntBASIC10.92□□□□□ -0.66
Cdc40Q9DC48 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdc40Q9DC48 Gm17931-201ENSMUST00000208132 634 ntBASIC10.92□□□□□ -0.66
Cdc40Q9DC48 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.92□□□□□ -0.66
Cdc40Q9DC48 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdc40Q9DC48 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.92□□□□□ -0.66
Cdc40Q9DC48 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.92□□□□□ -0.66
Cdc40Q9DC48 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10.92□□□□□ -0.66
Cdc40Q9DC48 AC133602.1-201ENSMUST00000227510 509 ntBASIC10.92□□□□□ -0.66
Cdc40Q9DC48 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdc40Q9DC48 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdc40Q9DC48 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdc40Q9DC48 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Cdc40Q9DC48 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdc40Q9DC48 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdc40Q9DC48 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
Cdc40Q9DC48 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdc40Q9DC48 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
Cdc40Q9DC48 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cdc40Q9DC48 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.92□□□□□ -0.66
Cdc40Q9DC48 CT025678.1-201ENSMUST00000214795 2972 ntBASIC10.92□□□□□ -0.66
Cdc40Q9DC48 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.92□□□□□ -0.66
Cdc40Q9DC48 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cdc40Q9DC48 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms