Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trim13Q9CYB0 Gm5706-201ENSMUST00000181525 993 ntBASIC10.85□□□□□ -0.67
Trim13Q9CYB0 Gm3890-201ENSMUST00000182416 207 ntBASIC10.85□□□□□ -0.67
Trim13Q9CYB0 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim13Q9CYB0 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC10.85□□□□□ -0.67
Trim13Q9CYB0 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC10.85□□□□□ -0.67
Trim13Q9CYB0 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trim13Q9CYB0 Gm4935-201ENSMUST00000221316 1198 ntBASIC10.85□□□□□ -0.67
Trim13Q9CYB0 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC10.85□□□□□ -0.67
Trim13Q9CYB0 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim13Q9CYB0 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim13Q9CYB0 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Trim13Q9CYB0 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim13Q9CYB0 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Trim13Q9CYB0 Gm8420-201ENSMUST00000097103 598 ntBASIC10.85□□□□□ -0.67
Trim13Q9CYB0 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim13Q9CYB0 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim13Q9CYB0 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trim13Q9CYB0 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim13Q9CYB0 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim13Q9CYB0 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Trim13Q9CYB0 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim13Q9CYB0 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim13Q9CYB0 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim13Q9CYB0 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Trim13Q9CYB0 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim13Q9CYB0 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim13Q9CYB0 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trim13Q9CYB0 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim13Q9CYB0 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.85□□□□□ -0.67
Trim13Q9CYB0 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Trim13Q9CYB0 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Trim13Q9CYB0 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trim13Q9CYB0 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim13Q9CYB0 BC043934-202ENSMUST00000185694 2356 ntBASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Gm7553-201ENSMUST00000185805 1426 ntBASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Gm8155-201ENSMUST00000216363 1612 ntBASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Gm13226-201ENSMUST00000117838 404 ntBASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Gm12058-201ENSMUST00000118614 437 ntBASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Gm11425-201ENSMUST00000119608 498 ntBASIC10.84□□□□□ -0.67
Trim13Q9CYB0 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Mir1982-201ENSMUST00000157368 74 ntBASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Gm6222-202ENSMUST00000182143 629 ntBASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Gm43818-201ENSMUST00000200605 466 ntBASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Gm17872-201ENSMUST00000222550 532 ntBASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Gm9396-201ENSMUST00000076703 567 ntBASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.84□□□□□ -0.67
Trim13Q9CYB0 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim13Q9CYB0 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Trim13Q9CYB0 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Trim13Q9CYB0 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim13Q9CYB0 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim13Q9CYB0 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim13Q9CYB0 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim13Q9CYB0 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim13Q9CYB0 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Trim13Q9CYB0 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim13Q9CYB0 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim13Q9CYB0 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trim13Q9CYB0 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trim13Q9CYB0 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim13Q9CYB0 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim13Q9CYB0 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim13Q9CYB0 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms