Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Gm11989-201ENSMUST00000117240 672 ntBASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Gm12463-201ENSMUST00000118271 849 ntBASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Gm11362-201ENSMUST00000118838 850 ntBASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Gm3329-201ENSMUST00000159873 556 ntBASIC11.63□□□□□ -0.55
Ssu72Q9CY97 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Gm33366-201ENSMUST00000195583 3827 ntBASIC11.63□□□□□ -0.55
Ssu72Q9CY97 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Gm43371-201ENSMUST00000202838 1031 ntBASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Gm8956-201ENSMUST00000203939 825 ntBASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.63□□□□□ -0.55
Ssu72Q9CY97 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ssu72Q9CY97 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.62□□□□□ -0.55
Ssu72Q9CY97 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ssu72Q9CY97 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ssu72Q9CY97 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ssu72Q9CY97 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ssu72Q9CY97 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.62□□□□□ -0.55
Ssu72Q9CY97 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.62□□□□□ -0.55
Ssu72Q9CY97 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.62□□□□□ -0.55
Ssu72Q9CY97 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
Ssu72Q9CY97 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ssu72Q9CY97 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.62□□□□□ -0.55
Ssu72Q9CY97 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ssu72Q9CY97 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ssu72Q9CY97 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Ssu72Q9CY97 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ssu72Q9CY97 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ssu72Q9CY97 Gm15004-201ENSMUST00000119192 630 ntBASIC11.62□□□□□ -0.55
Ssu72Q9CY97 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Ssu72Q9CY97 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ssu72Q9CY97 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.62□□□□□ -0.55
Ssu72Q9CY97 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Ssu72Q9CY97 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.62□□□□□ -0.55
Ssu72Q9CY97 Gm37102-201ENSMUST00000195740 1105 ntBASIC11.62□□□□□ -0.55
Ssu72Q9CY97 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.62□□□□□ -0.55
Ssu72Q9CY97 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.62□□□□□ -0.55
Ssu72Q9CY97 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.62□□□□□ -0.55
Ssu72Q9CY97 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.62□□□□□ -0.55
Ssu72Q9CY97 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ssu72Q9CY97 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ssu72Q9CY97 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ssu72Q9CY97 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ssu72Q9CY97 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ssu72Q9CY97 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ssu72Q9CY97 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ssu72Q9CY97 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.62□□□□□ -0.55
Ssu72Q9CY97 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ssu72Q9CY97 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ssu72Q9CY97 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
Ssu72Q9CY97 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ssu72Q9CY97 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.62□□□□□ -0.55
Ssu72Q9CY97 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ssu72Q9CY97 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ssu72Q9CY97 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ssu72Q9CY97 Gm8752-201ENSMUST00000173427 1694 ntBASIC11.62□□□□□ -0.55
Ssu72Q9CY97 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ssu72Q9CY97 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ssu72Q9CY97 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssu72Q9CY97 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssu72Q9CY97 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ssu72Q9CY97 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssu72Q9CY97 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ssu72Q9CY97 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssu72Q9CY97 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ssu72Q9CY97 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms