Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retreg3Q9CQV4 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Gm26143-201ENSMUST00000104480 108 ntBASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Gm12757-201ENSMUST00000119465 800 ntBASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Gm6963-201ENSMUST00000147879 379 ntBASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Gm20915-201ENSMUST00000191575 663 ntBASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 AA914427-201ENSMUST00000193194 1166 ntBASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Gm19231-201ENSMUST00000193212 830 ntBASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 AL645546.2-201ENSMUST00000224526 265 ntBASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Gzmn-202ENSMUST00000225535 989 ntBASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Gm42766-201ENSMUST00000200233 1332 ntBASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Gm43771-201ENSMUST00000202931 1578 ntBASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retreg3Q9CQV4 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retreg3Q9CQV4 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retreg3Q9CQV4 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retreg3Q9CQV4 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retreg3Q9CQV4 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Retreg3Q9CQV4 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Retreg3Q9CQV4 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retreg3Q9CQV4 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retreg3Q9CQV4 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retreg3Q9CQV4 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.24□□□□□ -0.45
Retreg3Q9CQV4 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retreg3Q9CQV4 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retreg3Q9CQV4 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.24□□□□□ -0.45
Retreg3Q9CQV4 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Retreg3Q9CQV4 Gm13665-201ENSMUST00000120830 528 ntBASIC12.24□□□□□ -0.45
Retreg3Q9CQV4 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Retreg3Q9CQV4 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC12.24□□□□□ -0.45
Retreg3Q9CQV4 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Retreg3Q9CQV4 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Retreg3Q9CQV4 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retreg3Q9CQV4 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retreg3Q9CQV4 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.24□□□□□ -0.45
Retreg3Q9CQV4 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Retreg3Q9CQV4 Gm27046-201ENSMUST00000182160 463 ntBASIC12.24□□□□□ -0.45
Retreg3Q9CQV4 Asb4-202ENSMUST00000183358 1143 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Retreg3Q9CQV4 Gm2260-201ENSMUST00000184965 657 ntBASIC12.24□□□□□ -0.45
Retreg3Q9CQV4 Gm37241-201ENSMUST00000191736 523 ntBASIC12.24□□□□□ -0.45
Retreg3Q9CQV4 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC12.24□□□□□ -0.45
Retreg3Q9CQV4 Gm44636-201ENSMUST00000206130 755 ntBASIC12.24□□□□□ -0.45
Retreg3Q9CQV4 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retreg3Q9CQV4 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Retreg3Q9CQV4 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms