Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim33Q99PP7 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.76□□□□□ -0.53
Trim33Q99PP7 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trim33Q99PP7 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim33Q99PP7 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim33Q99PP7 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim33Q99PP7 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim33Q99PP7 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim33Q99PP7 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.76□□□□□ -0.53
Trim33Q99PP7 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim33Q99PP7 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim33Q99PP7 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim33Q99PP7 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.76□□□□□ -0.53
Trim33Q99PP7 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.76□□□□□ -0.53
Trim33Q99PP7 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim33Q99PP7 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.76□□□□□ -0.53
Trim33Q99PP7 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.76□□□□□ -0.53
Trim33Q99PP7 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.76□□□□□ -0.53
Trim33Q99PP7 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim33Q99PP7 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim33Q99PP7 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim33Q99PP7 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trim33Q99PP7 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.76□□□□□ -0.53
Trim33Q99PP7 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Trim33Q99PP7 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trim33Q99PP7 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.75□□□□□ -0.53
Trim33Q99PP7 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim33Q99PP7 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim33Q99PP7 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim33Q99PP7 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim33Q99PP7 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim33Q99PP7 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.75□□□□□ -0.53
Trim33Q99PP7 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim33Q99PP7 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trim33Q99PP7 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim33Q99PP7 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim33Q99PP7 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim33Q99PP7 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim33Q99PP7 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim33Q99PP7 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim33Q99PP7 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim33Q99PP7 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim33Q99PP7 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trim33Q99PP7 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Trim33Q99PP7 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Trim33Q99PP7 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.75□□□□□ -0.53
Trim33Q99PP7 Gm5419-201ENSMUST00000119301 527 ntBASIC11.75□□□□□ -0.53
Trim33Q99PP7 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim33Q99PP7 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim33Q99PP7 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim33Q99PP7 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim33Q99PP7 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim33Q99PP7 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trim33Q99PP7 Gm5708-201ENSMUST00000196289 886 ntBASIC11.75□□□□□ -0.53
Trim33Q99PP7 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim33Q99PP7 Gm5455-201ENSMUST00000058710 715 ntBASIC11.75□□□□□ -0.53
Trim33Q99PP7 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim33Q99PP7 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim33Q99PP7 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim33Q99PP7 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim33Q99PP7 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim33Q99PP7 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim33Q99PP7 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim33Q99PP7 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim33Q99PP7 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.75□□□□□ -0.53
Trim33Q99PP7 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim33Q99PP7 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim33Q99PP7 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim33Q99PP7 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim33Q99PP7 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim33Q99PP7 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trim33Q99PP7 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trim33Q99PP7 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim33Q99PP7 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim33Q99PP7 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim33Q99PP7 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim33Q99PP7 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim33Q99PP7 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim33Q99PP7 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.74□□□□□ -0.53
Trim33Q99PP7 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim33Q99PP7 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim33Q99PP7 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim33Q99PP7 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim33Q99PP7 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim33Q99PP7 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim33Q99PP7 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim33Q99PP7 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.74□□□□□ -0.53
Trim33Q99PP7 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.74□□□□□ -0.53
Trim33Q99PP7 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim33Q99PP7 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim33Q99PP7 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trim33Q99PP7 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim33Q99PP7 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trim33Q99PP7 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.74□□□□□ -0.53
Trim33Q99PP7 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trim33Q99PP7 Gm5706-201ENSMUST00000181525 993 ntBASIC11.74□□□□□ -0.53
Trim33Q99PP7 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.74□□□□□ -0.53
Trim33Q99PP7 Gm43692-201ENSMUST00000198236 1062 ntBASIC11.74□□□□□ -0.53
Trim33Q99PP7 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.74□□□□□ -0.53
Trim33Q99PP7 Gm17931-201ENSMUST00000208132 634 ntBASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms