Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Gm11836-201ENSMUST00000121022 441 ntBASIC12.47□□□□□ -0.41
Sf3b1Q99NB9 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.47□□□□□ -0.41
Sf3b1Q99NB9 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3b1Q99NB9 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3b1Q99NB9 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3b1Q99NB9 Gm5778-201ENSMUST00000171003 1072 ntBASIC12.47□□□□□ -0.41
Sf3b1Q99NB9 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC12.47□□□□□ -0.41
Sf3b1Q99NB9 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Sf3b1Q99NB9 Gm7600-201ENSMUST00000209657 785 ntBASIC12.47□□□□□ -0.41
Sf3b1Q99NB9 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.47□□□□□ -0.41
Sf3b1Q99NB9 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.47□□□□□ -0.41
Sf3b1Q99NB9 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3b1Q99NB9 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.47□□□□□ -0.41
Sf3b1Q99NB9 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3b1Q99NB9 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3b1Q99NB9 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.47□□□□□ -0.41
Sf3b1Q99NB9 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3b1Q99NB9 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.47□□□□□ -0.41
Sf3b1Q99NB9 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3b1Q99NB9 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3b1Q99NB9 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3b1Q99NB9 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3b1Q99NB9 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3b1Q99NB9 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3b1Q99NB9 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3b1Q99NB9 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3b1Q99NB9 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3b1Q99NB9 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3b1Q99NB9 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3b1Q99NB9 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.47□□□□□ -0.41
Sf3b1Q99NB9 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3b1Q99NB9 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3b1Q99NB9 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3b1Q99NB9 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3b1Q99NB9 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Sf3b1Q99NB9 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sf3b1Q99NB9 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Sf3b1Q99NB9 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sf3b1Q99NB9 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Sf3b1Q99NB9 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sf3b1Q99NB9 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sf3b1Q99NB9 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sf3b1Q99NB9 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Sf3b1Q99NB9 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Sf3b1Q99NB9 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sf3b1Q99NB9 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.46□□□□□ -0.41
Sf3b1Q99NB9 Gm11451-201ENSMUST00000118946 630 ntBASIC12.46□□□□□ -0.41
Sf3b1Q99NB9 Gm15782-201ENSMUST00000121073 445 ntBASIC12.46□□□□□ -0.41
Sf3b1Q99NB9 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.46□□□□□ -0.41
Sf3b1Q99NB9 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sf3b1Q99NB9 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC12.46□□□□□ -0.41
Sf3b1Q99NB9 Gm9192-201ENSMUST00000183221 985 ntBASIC12.46□□□□□ -0.41
Sf3b1Q99NB9 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.46□□□□□ -0.41
Sf3b1Q99NB9 Gm37299-201ENSMUST00000193951 826 ntBASIC12.46□□□□□ -0.41
Sf3b1Q99NB9 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.46□□□□□ -0.41
Sf3b1Q99NB9 AC140293.1-201ENSMUST00000225626 1247 ntBASIC12.46□□□□□ -0.41
Sf3b1Q99NB9 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Sf3b1Q99NB9 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sf3b1Q99NB9 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.46□□□□□ -0.41
Sf3b1Q99NB9 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sf3b1Q99NB9 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sf3b1Q99NB9 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Sf3b1Q99NB9 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.46□□□□□ -0.42
Sf3b1Q99NB9 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sf3b1Q99NB9 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
Sf3b1Q99NB9 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Sf3b1Q99NB9 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sf3b1Q99NB9 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Sf3b1Q99NB9 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b1Q99NB9 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b1Q99NB9 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b1Q99NB9 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b1Q99NB9 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b1Q99NB9 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b1Q99NB9 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b1Q99NB9 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b1Q99NB9 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b1Q99NB9 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b1Q99NB9 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.45□□□□□ -0.42
Sf3b1Q99NB9 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.45□□□□□ -0.42
Sf3b1Q99NB9 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Sf3b1Q99NB9 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.45□□□□□ -0.42
Sf3b1Q99NB9 Gm12516-201ENSMUST00000120819 385 ntBASIC12.45□□□□□ -0.42
Sf3b1Q99NB9 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b1Q99NB9 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b1Q99NB9 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Sf3b1Q99NB9 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b1Q99NB9 Gm6114-201ENSMUST00000182472 968 ntBASIC12.45□□□□□ -0.42
Sf3b1Q99NB9 Gm9358-201ENSMUST00000183067 927 ntBASIC12.45□□□□□ -0.42
Sf3b1Q99NB9 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.45□□□□□ -0.42
Sf3b1Q99NB9 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b1Q99NB9 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.45□□□□□ -0.42
Sf3b1Q99NB9 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b1Q99NB9 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Sf3b1Q99NB9 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b1Q99NB9 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b1Q99NB9 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b1Q99NB9 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b1Q99NB9 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sf3b1Q99NB9 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 165.4 ms