Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf111Q99ML9 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.4□□□□□ -0.58
Rnf111Q99ML9 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.4□□□□□ -0.58
Rnf111Q99ML9 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.4□□□□□ -0.58
Rnf111Q99ML9 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.4□□□□□ -0.58
Rnf111Q99ML9 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf111Q99ML9 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf111Q99ML9 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Rnf111Q99ML9 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf111Q99ML9 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf111Q99ML9 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Rnf111Q99ML9 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Rnf111Q99ML9 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Rnf111Q99ML9 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Rnf111Q99ML9 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Rnf111Q99ML9 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Rnf111Q99ML9 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Rnf111Q99ML9 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Rnf111Q99ML9 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Rnf111Q99ML9 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Rnf111Q99ML9 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.39□□□□□ -0.59
Rnf111Q99ML9 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf111Q99ML9 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf111Q99ML9 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf111Q99ML9 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf111Q99ML9 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf111Q99ML9 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf111Q99ML9 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf111Q99ML9 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf111Q99ML9 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Rnf111Q99ML9 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf111Q99ML9 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf111Q99ML9 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Rnf111Q99ML9 Gm12106-201ENSMUST00000116006 1200 ntBASIC11.39□□□□□ -0.59
Rnf111Q99ML9 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf111Q99ML9 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf111Q99ML9 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.39□□□□□ -0.59
Rnf111Q99ML9 Gm7584-201ENSMUST00000175829 940 ntBASIC11.39□□□□□ -0.59
Rnf111Q99ML9 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.39□□□□□ -0.59
Rnf111Q99ML9 Gm18827-201ENSMUST00000188341 790 ntBASIC11.39□□□□□ -0.59
Rnf111Q99ML9 Gm7430-201ENSMUST00000193824 1144 ntBASIC11.39□□□□□ -0.59
Rnf111Q99ML9 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.39□□□□□ -0.59
Rnf111Q99ML9 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf111Q99ML9 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf111Q99ML9 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.39□□□□□ -0.59
Rnf111Q99ML9 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.39□□□□□ -0.59
Rnf111Q99ML9 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf111Q99ML9 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Rnf111Q99ML9 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf111Q99ML9 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf111Q99ML9 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf111Q99ML9 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.39□□□□□ -0.59
Rnf111Q99ML9 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf111Q99ML9 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Rnf111Q99ML9 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.39□□□□□ -0.59
Rnf111Q99ML9 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.39□□□□□ -0.59
Rnf111Q99ML9 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf111Q99ML9 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.39□□□□□ -0.59
Rnf111Q99ML9 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rnf111Q99ML9 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.39□□□□□ -0.59
Rnf111Q99ML9 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf111Q99ML9 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf111Q99ML9 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.38□□□□□ -0.59
Rnf111Q99ML9 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf111Q99ML9 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf111Q99ML9 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.38□□□□□ -0.59
Rnf111Q99ML9 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.38□□□□□ -0.59
Rnf111Q99ML9 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf111Q99ML9 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.38□□□□□ -0.59
Rnf111Q99ML9 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf111Q99ML9 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.38□□□□□ -0.59
Rnf111Q99ML9 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.38□□□□□ -0.59
Rnf111Q99ML9 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf111Q99ML9 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Rnf111Q99ML9 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Rnf111Q99ML9 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.38□□□□□ -0.59
Rnf111Q99ML9 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf111Q99ML9 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf111Q99ML9 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Rnf111Q99ML9 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Rnf111Q99ML9 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.38□□□□□ -0.59
Rnf111Q99ML9 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf111Q99ML9 Gm12015-201ENSMUST00000117065 843 ntBASIC11.38□□□□□ -0.59
Rnf111Q99ML9 Gm13350-201ENSMUST00000120519 479 ntBASIC11.38□□□□□ -0.59
Rnf111Q99ML9 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.38□□□□□ -0.59
Rnf111Q99ML9 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC11.38□□□□□ -0.59
Rnf111Q99ML9 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.38□□□□□ -0.59
Rnf111Q99ML9 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf111Q99ML9 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.38□□□□□ -0.59
Rnf111Q99ML9 Gm5070-201ENSMUST00000177599 862 ntBASIC11.38□□□□□ -0.59
Rnf111Q99ML9 Gm9230-201ENSMUST00000188228 532 ntBASIC11.38□□□□□ -0.59
Rnf111Q99ML9 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf111Q99ML9 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf111Q99ML9 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.38□□□□□ -0.59
Rnf111Q99ML9 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.38□□□□□ -0.59
Rnf111Q99ML9 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf111Q99ML9 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf111Q99ML9 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Rnf111Q99ML9 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.38□□□□□ -0.59
Rnf111Q99ML9 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms