Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Nkd1Q99MH6 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkd1Q99MH6 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.04□□□□□ -0.64
Nkd1Q99MH6 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkd1Q99MH6 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkd1Q99MH6 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nkd1Q99MH6 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkd1Q99MH6 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkd1Q99MH6 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nkd1Q99MH6 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nkd1Q99MH6 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkd1Q99MH6 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkd1Q99MH6 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkd1Q99MH6 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Nkd1Q99MH6 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkd1Q99MH6 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nkd1Q99MH6 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.04□□□□□ -0.64
Nkd1Q99MH6 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nkd1Q99MH6 Gm13297-201ENSMUST00000120205 934 ntBASIC11.04□□□□□ -0.64
Nkd1Q99MH6 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nkd1Q99MH6 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.04□□□□□ -0.64
Nkd1Q99MH6 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkd1Q99MH6 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.04□□□□□ -0.64
Nkd1Q99MH6 Gm36991-201ENSMUST00000191800 648 ntBASIC11.04□□□□□ -0.64
Nkd1Q99MH6 Gm18893-201ENSMUST00000198416 943 ntBASIC11.04□□□□□ -0.64
Nkd1Q99MH6 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nkd1Q99MH6 Olfr284-202ENSMUST00000206647 966 ntBASIC11.04□□□□□ -0.64
Nkd1Q99MH6 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.04□□□□□ -0.64
Nkd1Q99MH6 Gm8712-201ENSMUST00000221090 701 ntBASIC11.04□□□□□ -0.64
Nkd1Q99MH6 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.04□□□□□ -0.64
Nkd1Q99MH6 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nkd1Q99MH6 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkd1Q99MH6 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkd1Q99MH6 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkd1Q99MH6 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Nkd1Q99MH6 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.04□□□□□ -0.64
Nkd1Q99MH6 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.04□□□□□ -0.64
Nkd1Q99MH6 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nkd1Q99MH6 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Nkd1Q99MH6 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.03□□□□□ -0.64
Nkd1Q99MH6 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nkd1Q99MH6 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkd1Q99MH6 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nkd1Q99MH6 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nkd1Q99MH6 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkd1Q99MH6 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkd1Q99MH6 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.03□□□□□ -0.64
Nkd1Q99MH6 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkd1Q99MH6 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.03□□□□□ -0.64
Nkd1Q99MH6 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Nkd1Q99MH6 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC11.03□□□□□ -0.64
Nkd1Q99MH6 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Nkd1Q99MH6 Gm12957-201ENSMUST00000117835 377 ntBASIC11.03□□□□□ -0.64
Nkd1Q99MH6 Gm14127-201ENSMUST00000117906 678 ntBASIC11.03□□□□□ -0.64
Nkd1Q99MH6 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.03□□□□□ -0.64
Nkd1Q99MH6 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Nkd1Q99MH6 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.03□□□□□ -0.64
Nkd1Q99MH6 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkd1Q99MH6 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.03□□□□□ -0.64
Nkd1Q99MH6 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nkd1Q99MH6 Gm6114-201ENSMUST00000182472 968 ntBASIC11.03□□□□□ -0.64
Nkd1Q99MH6 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Nkd1Q99MH6 Gm18935-201ENSMUST00000212692 664 ntBASIC11.03□□□□□ -0.64
Nkd1Q99MH6 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.03□□□□□ -0.64
Nkd1Q99MH6 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Nkd1Q99MH6 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nkd1Q99MH6 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkd1Q99MH6 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkd1Q99MH6 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkd1Q99MH6 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nkd1Q99MH6 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkd1Q99MH6 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.03□□□□□ -0.64
Nkd1Q99MH6 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkd1Q99MH6 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Nkd1Q99MH6 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nkd1Q99MH6 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nkd1Q99MH6 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.03□□□□□ -0.64
Nkd1Q99MH6 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.03□□□□□ -0.64
Nkd1Q99MH6 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Nkd1Q99MH6 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Nkd1Q99MH6 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.03□□□□□ -0.64
Nkd1Q99MH6 Gm10652-201ENSMUST00000199790 2622 ntBASIC11.03□□□□□ -0.64
Nkd1Q99MH6 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nkd1Q99MH6 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.64
Nkd1Q99MH6 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nkd1Q99MH6 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nkd1Q99MH6 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nkd1Q99MH6 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Nkd1Q99MH6 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Nkd1Q99MH6 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.02□□□□□ -0.65
Nkd1Q99MH6 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Nkd1Q99MH6 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkd1Q99MH6 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Nkd1Q99MH6 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Nkd1Q99MH6 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Nkd1Q99MH6 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.02□□□□□ -0.65
Nkd1Q99MH6 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms