Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Scrt1Q99M85 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Gm44958-201ENSMUST00000203734 736 ntBASIC10.34□□□□□ -0.75
Scrt1Q99M85 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC10.34□□□□□ -0.75
Scrt1Q99M85 AC154305.4-201ENSMUST00000224520 614 ntBASIC10.34□□□□□ -0.75
Scrt1Q99M85 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.34□□□□□ -0.75
Scrt1Q99M85 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Gm6430-201ENSMUST00000054664 1248 ntBASIC10.34□□□□□ -0.75
Scrt1Q99M85 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC10.34□□□□□ -0.75
Scrt1Q99M85 n-R5s211-201ENSMUST00000093689 119 ntBASIC10.34□□□□□ -0.75
Scrt1Q99M85 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Scrt1Q99M85 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.75
Scrt1Q99M85 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Scrt1Q99M85 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Scrt1Q99M85 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Scrt1Q99M85 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Scrt1Q99M85 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Scrt1Q99M85 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Scrt1Q99M85 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
Scrt1Q99M85 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Scrt1Q99M85 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.33□□□□□ -0.76
Scrt1Q99M85 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Scrt1Q99M85 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Scrt1Q99M85 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Scrt1Q99M85 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Scrt1Q99M85 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Scrt1Q99M85 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Scrt1Q99M85 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Scrt1Q99M85 Gm24231-201ENSMUST00000104315 133 ntBASIC10.33□□□□□ -0.76
Scrt1Q99M85 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC10.33□□□□□ -0.76
Scrt1Q99M85 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Scrt1Q99M85 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC10.33□□□□□ -0.76
Scrt1Q99M85 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Scrt1Q99M85 Gm42518-201ENSMUST00000196277 938 ntBASIC10.33□□□□□ -0.76
Scrt1Q99M85 Gm43186-201ENSMUST00000198130 824 ntBASIC10.33□□□□□ -0.76
Scrt1Q99M85 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Scrt1Q99M85 Gm45120-201ENSMUST00000208880 408 ntBASIC10.33□□□□□ -0.76
Scrt1Q99M85 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC10.33□□□□□ -0.76
Scrt1Q99M85 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Scrt1Q99M85 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Scrt1Q99M85 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Scrt1Q99M85 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Scrt1Q99M85 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Scrt1Q99M85 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
Scrt1Q99M85 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Scrt1Q99M85 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Scrt1Q99M85 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Scrt1Q99M85 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Scrt1Q99M85 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Scrt1Q99M85 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Scrt1Q99M85 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Scrt1Q99M85 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Scrt1Q99M85 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Scrt1Q99M85 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Scrt1Q99M85 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.33□□□□□ -0.76
Scrt1Q99M85 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Scrt1Q99M85 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
Scrt1Q99M85 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
Scrt1Q99M85 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Scrt1Q99M85 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Scrt1Q99M85 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Scrt1Q99M85 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Scrt1Q99M85 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Scrt1Q99M85 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Scrt1Q99M85 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Scrt1Q99M85 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Scrt1Q99M85 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Scrt1Q99M85 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Scrt1Q99M85 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Scrt1Q99M85 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Scrt1Q99M85 Gm42498-201ENSMUST00000199981 1372 ntBASIC10.32□□□□□ -0.76
Scrt1Q99M85 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Scrt1Q99M85 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Scrt1Q99M85 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.32□□□□□ -0.76
Scrt1Q99M85 Gm13600-201ENSMUST00000117949 744 ntBASIC10.32□□□□□ -0.76
Scrt1Q99M85 Gm15566-201ENSMUST00000121130 590 ntBASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms