Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chmp1b1Q99LU0 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Gm15610-201ENSMUST00000120584 195 ntBASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Gm6963-201ENSMUST00000147879 379 ntBASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Gm37259-201ENSMUST00000193903 849 ntBASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Rprl1-202ENSMUST00000198476 238 ntBASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Gm13097-201ENSMUST00000210722 397 ntBASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Chmp1b1Q99LU0 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 Gm12015-201ENSMUST00000117065 843 ntBASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 Gm4857-201ENSMUST00000192718 785 ntBASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 Mir433-201ENSMUST00000093564 124 ntBASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp1b1Q99LU0 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms