Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Clp1Q99LI9 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clp1Q99LI9 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clp1Q99LI9 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Clp1Q99LI9 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Clp1Q99LI9 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Clp1Q99LI9 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Clp1Q99LI9 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Clp1Q99LI9 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clp1Q99LI9 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Clp1Q99LI9 Gm8899-201ENSMUST00000214635 1332 ntBASIC12.39□□□□□ -0.43
Clp1Q99LI9 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.39□□□□□ -0.43
Clp1Q99LI9 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.39□□□□□ -0.43
Clp1Q99LI9 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Clp1Q99LI9 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.39□□□□□ -0.43
Clp1Q99LI9 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clp1Q99LI9 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC12.39□□□□□ -0.43
Clp1Q99LI9 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clp1Q99LI9 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.39□□□□□ -0.43
Clp1Q99LI9 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clp1Q99LI9 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clp1Q99LI9 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clp1Q99LI9 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Clp1Q99LI9 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clp1Q99LI9 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Clp1Q99LI9 Gm13422-201ENSMUST00000118834 504 ntBASIC12.39□□□□□ -0.43
Clp1Q99LI9 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.39□□□□□ -0.43
Clp1Q99LI9 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC12.39□□□□□ -0.43
Clp1Q99LI9 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Clp1Q99LI9 Gm25492-201ENSMUST00000157383 129 ntBASIC12.39□□□□□ -0.43
Clp1Q99LI9 Gm17192-201ENSMUST00000169031 511 ntBASIC12.39□□□□□ -0.43
Clp1Q99LI9 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Clp1Q99LI9 Gm17709-201ENSMUST00000174536 1096 ntBASIC12.39□□□□□ -0.43
Clp1Q99LI9 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC12.39□□□□□ -0.43
Clp1Q99LI9 Gm18776-201ENSMUST00000188833 654 ntBASIC12.39□□□□□ -0.43
Clp1Q99LI9 Gm42660-201ENSMUST00000197733 947 ntBASIC12.39□□□□□ -0.43
Clp1Q99LI9 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.39□□□□□ -0.43
Clp1Q99LI9 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clp1Q99LI9 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clp1Q99LI9 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.39□□□□□ -0.43
Clp1Q99LI9 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Clp1Q99LI9 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Clp1Q99LI9 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clp1Q99LI9 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Clp1Q99LI9 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clp1Q99LI9 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clp1Q99LI9 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Clp1Q99LI9 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Clp1Q99LI9 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clp1Q99LI9 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Clp1Q99LI9 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clp1Q99LI9 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clp1Q99LI9 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.38□□□□□ -0.43
Clp1Q99LI9 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clp1Q99LI9 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clp1Q99LI9 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Clp1Q99LI9 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clp1Q99LI9 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clp1Q99LI9 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clp1Q99LI9 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.38□□□□□ -0.43
Clp1Q99LI9 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.38□□□□□ -0.43
Clp1Q99LI9 Gm15003-201ENSMUST00000118884 446 ntBASIC12.38□□□□□ -0.43
Clp1Q99LI9 Gm15549-201ENSMUST00000121595 622 ntBASIC12.38□□□□□ -0.43
Clp1Q99LI9 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC12.38□□□□□ -0.43
Clp1Q99LI9 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC12.38□□□□□ -0.43
Clp1Q99LI9 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Clp1Q99LI9 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Clp1Q99LI9 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Clp1Q99LI9 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Clp1Q99LI9 Gm17214-201ENSMUST00000164501 541 ntBASIC12.38□□□□□ -0.43
Clp1Q99LI9 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.38□□□□□ -0.43
Clp1Q99LI9 Gm9081-201ENSMUST00000182346 991 ntBASIC12.38□□□□□ -0.43
Clp1Q99LI9 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Clp1Q99LI9 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.38□□□□□ -0.43
Clp1Q99LI9 Gm6423-201ENSMUST00000204315 934 ntBASIC12.38□□□□□ -0.43
Clp1Q99LI9 Gm10046-201ENSMUST00000208208 632 ntTSL 2 BASIC12.38□□□□□ -0.43
Clp1Q99LI9 Gm5996-201ENSMUST00000211110 718 ntBASIC12.38□□□□□ -0.43
Clp1Q99LI9 AC159246.1-201ENSMUST00000214478 249 ntBASIC12.38□□□□□ -0.43
Clp1Q99LI9 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC12.38□□□□□ -0.43
Clp1Q99LI9 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Clp1Q99LI9 AC130477.1-201ENSMUST00000226982 420 ntBASIC12.38□□□□□ -0.43
Clp1Q99LI9 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clp1Q99LI9 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Clp1Q99LI9 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clp1Q99LI9 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clp1Q99LI9 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clp1Q99LI9 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Clp1Q99LI9 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clp1Q99LI9 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clp1Q99LI9 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clp1Q99LI9 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clp1Q99LI9 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clp1Q99LI9 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clp1Q99LI9 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Clp1Q99LI9 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clp1Q99LI9 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clp1Q99LI9 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clp1Q99LI9 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.38□□□□□ -0.43
Clp1Q99LI9 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Clp1Q99LI9 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms