Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb1Q91Y08 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb1Q91Y08 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb1Q91Y08 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb1Q91Y08 Rgr-203ENSMUST00000225070 4704 ntBASIC12.18□□□□□ -0.46
Pcdhb1Q91Y08 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb1Q91Y08 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb1Q91Y08 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb1Q91Y08 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb1Q91Y08 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb1Q91Y08 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb1Q91Y08 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb1Q91Y08 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb1Q91Y08 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb1Q91Y08 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.18□□□□□ -0.46
Pcdhb1Q91Y08 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb1Q91Y08 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb1Q91Y08 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.18□□□□□ -0.46
Pcdhb1Q91Y08 Gm44755-201ENSMUST00000207830 2102 ntBASIC12.18□□□□□ -0.46
Pcdhb1Q91Y08 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.18□□□□□ -0.46
Pcdhb1Q91Y08 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb1Q91Y08 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
Pcdhb1Q91Y08 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb1Q91Y08 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb1Q91Y08 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb1Q91Y08 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Pcdhb1Q91Y08 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Pcdhb1Q91Y08 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.18□□□□□ -0.46
Pcdhb1Q91Y08 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb1Q91Y08 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb1Q91Y08 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Pcdhb1Q91Y08 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb1Q91Y08 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhb1Q91Y08 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb1Q91Y08 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb1Q91Y08 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb1Q91Y08 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb1Q91Y08 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Pcdhb1Q91Y08 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Pcdhb1Q91Y08 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb1Q91Y08 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb1Q91Y08 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.17□□□□□ -0.46
Pcdhb1Q91Y08 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb1Q91Y08 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.17□□□□□ -0.46
Pcdhb1Q91Y08 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb1Q91Y08 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Pcdhb1Q91Y08 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Pcdhb1Q91Y08 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb1Q91Y08 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb1Q91Y08 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.17□□□□□ -0.46
Pcdhb1Q91Y08 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.17□□□□□ -0.46
Pcdhb1Q91Y08 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb1Q91Y08 Gm11663-201ENSMUST00000117888 290 ntBASIC12.17□□□□□ -0.46
Pcdhb1Q91Y08 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb1Q91Y08 Gm16570-201ENSMUST00000161951 436 ntBASIC12.17□□□□□ -0.46
Pcdhb1Q91Y08 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb1Q91Y08 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb1Q91Y08 Gm45186-201ENSMUST00000206874 478 ntBASIC12.17□□□□□ -0.46
Pcdhb1Q91Y08 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.17□□□□□ -0.46
Pcdhb1Q91Y08 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.17□□□□□ -0.46
Pcdhb1Q91Y08 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.17□□□□□ -0.46
Pcdhb1Q91Y08 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb1Q91Y08 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb1Q91Y08 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb1Q91Y08 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb1Q91Y08 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb1Q91Y08 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb1Q91Y08 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb1Q91Y08 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.17□□□□□ -0.46
Pcdhb1Q91Y08 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Pcdhb1Q91Y08 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Pcdhb1Q91Y08 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb1Q91Y08 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb1Q91Y08 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb1Q91Y08 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb1Q91Y08 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb1Q91Y08 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb1Q91Y08 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Pcdhb1Q91Y08 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Pcdhb1Q91Y08 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb1Q91Y08 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb1Q91Y08 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb1Q91Y08 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb1Q91Y08 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Pcdhb1Q91Y08 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb1Q91Y08 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb1Q91Y08 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Pcdhb1Q91Y08 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb1Q91Y08 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Pcdhb1Q91Y08 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Pcdhb1Q91Y08 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb1Q91Y08 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb1Q91Y08 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.16□□□□□ -0.46
Pcdhb1Q91Y08 Gm11500-201ENSMUST00000118237 601 ntBASIC12.16□□□□□ -0.46
Pcdhb1Q91Y08 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb1Q91Y08 Gm8566-201ENSMUST00000120174 465 ntBASIC12.16□□□□□ -0.46
Pcdhb1Q91Y08 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.16□□□□□ -0.46
Pcdhb1Q91Y08 Gm26047-201ENSMUST00000157308 113 ntBASIC12.16□□□□□ -0.46
Pcdhb1Q91Y08 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.16□□□□□ -0.46
Pcdhb1Q91Y08 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 130.1 ms