Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 Gm8805-201ENSMUST00000117848 313 ntBASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 Gm37355-201ENSMUST00000193345 606 ntBASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 Gm5717-201ENSMUST00000198243 1062 ntBASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 Gm42732-201ENSMUST00000202887 1197 ntBASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 Gm18054-201ENSMUST00000207539 555 ntBASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 Gm10146-201ENSMUST00000072739 309 ntBASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 Gm10268-201ENSMUST00000085340 555 ntBASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 Gm42853-201ENSMUST00000201273 1387 ntBASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 AC129336.2-201ENSMUST00000218053 3086 ntBASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Gm13033-201ENSMUST00000117591 1057 ntBASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Gm11637-201ENSMUST00000120601 592 ntBASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Gm13123-201ENSMUST00000122173 492 ntBASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Gm8641-201ENSMUST00000186995 826 ntBASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Gm37490-201ENSMUST00000195566 724 ntBASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Gm42734-201ENSMUST00000201656 878 ntBASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Gm6013-201ENSMUST00000212264 699 ntBASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Gm45733-201ENSMUST00000212988 437 ntBASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Gm19309-201ENSMUST00000218295 205 ntBASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 AC154646.1-201ENSMUST00000225011 1092 ntBASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhb3Q91XZ7 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhb3Q91XZ7 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms