Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
H2afjQ8R1M2 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H2afjQ8R1M2 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
H2afjQ8R1M2 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H2afjQ8R1M2 Gm12241-201ENSMUST00000118330 726 ntBASIC10.9□□□□□ -0.66
H2afjQ8R1M2 Gm14832-201ENSMUST00000121289 322 ntBASIC10.9□□□□□ -0.66
H2afjQ8R1M2 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.9□□□□□ -0.66
H2afjQ8R1M2 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC10.9□□□□□ -0.66
H2afjQ8R1M2 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
H2afjQ8R1M2 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
H2afjQ8R1M2 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
H2afjQ8R1M2 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC10.9□□□□□ -0.66
H2afjQ8R1M2 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.9□□□□□ -0.66
H2afjQ8R1M2 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.9□□□□□ -0.66
H2afjQ8R1M2 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H2afjQ8R1M2 Olfr284-202ENSMUST00000206647 966 ntBASIC10.9□□□□□ -0.66
H2afjQ8R1M2 AC132384.14-201ENSMUST00000219346 1147 ntBASIC10.9□□□□□ -0.66
H2afjQ8R1M2 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC10.9□□□□□ -0.66
H2afjQ8R1M2 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
H2afjQ8R1M2 Gm10478-201ENSMUST00000084451 396 ntBASIC10.9□□□□□ -0.66
H2afjQ8R1M2 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
H2afjQ8R1M2 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.9□□□□□ -0.66
H2afjQ8R1M2 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H2afjQ8R1M2 Gm21136-201ENSMUST00000186812 2575 ntBASIC10.9□□□□□ -0.66
H2afjQ8R1M2 Gm6605-201ENSMUST00000031488 2574 ntBASIC10.9□□□□□ -0.66
H2afjQ8R1M2 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
H2afjQ8R1M2 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
H2afjQ8R1M2 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
H2afjQ8R1M2 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
H2afjQ8R1M2 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
H2afjQ8R1M2 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H2afjQ8R1M2 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC10.9□□□□□ -0.67
H2afjQ8R1M2 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
H2afjQ8R1M2 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
H2afjQ8R1M2 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.9□□□□□ -0.67
H2afjQ8R1M2 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
H2afjQ8R1M2 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
H2afjQ8R1M2 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.67
H2afjQ8R1M2 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.9□□□□□ -0.67
H2afjQ8R1M2 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
H2afjQ8R1M2 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
H2afjQ8R1M2 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afjQ8R1M2 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afjQ8R1M2 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afjQ8R1M2 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afjQ8R1M2 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC10.89□□□□□ -0.67
H2afjQ8R1M2 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afjQ8R1M2 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afjQ8R1M2 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
H2afjQ8R1M2 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afjQ8R1M2 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
H2afjQ8R1M2 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
H2afjQ8R1M2 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afjQ8R1M2 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
H2afjQ8R1M2 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
H2afjQ8R1M2 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
H2afjQ8R1M2 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afjQ8R1M2 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
H2afjQ8R1M2 Gm11222-201ENSMUST00000119005 738 ntBASIC10.89□□□□□ -0.67
H2afjQ8R1M2 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC10.89□□□□□ -0.67
H2afjQ8R1M2 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC10.89□□□□□ -0.67
H2afjQ8R1M2 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC10.89□□□□□ -0.67
H2afjQ8R1M2 Gm5706-201ENSMUST00000181525 993 ntBASIC10.89□□□□□ -0.67
H2afjQ8R1M2 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC10.89□□□□□ -0.67
H2afjQ8R1M2 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC10.89□□□□□ -0.67
H2afjQ8R1M2 Gm18054-201ENSMUST00000207539 555 ntBASIC10.89□□□□□ -0.67
H2afjQ8R1M2 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afjQ8R1M2 AC113031.8-201ENSMUST00000227856 631 ntBASIC10.89□□□□□ -0.67
H2afjQ8R1M2 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC10.89□□□□□ -0.67
H2afjQ8R1M2 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC10.89□□□□□ -0.67
H2afjQ8R1M2 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
H2afjQ8R1M2 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afjQ8R1M2 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afjQ8R1M2 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
H2afjQ8R1M2 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afjQ8R1M2 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afjQ8R1M2 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
H2afjQ8R1M2 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afjQ8R1M2 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afjQ8R1M2 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.89□□□□□ -0.67
H2afjQ8R1M2 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
H2afjQ8R1M2 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afjQ8R1M2 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afjQ8R1M2 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.89□□□□□ -0.67
H2afjQ8R1M2 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afjQ8R1M2 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afjQ8R1M2 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afjQ8R1M2 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
H2afjQ8R1M2 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afjQ8R1M2 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.89□□□□□ -0.67
H2afjQ8R1M2 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
H2afjQ8R1M2 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
H2afjQ8R1M2 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.88□□□□□ -0.67
H2afjQ8R1M2 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC10.88□□□□□ -0.67
H2afjQ8R1M2 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
H2afjQ8R1M2 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
H2afjQ8R1M2 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
H2afjQ8R1M2 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
H2afjQ8R1M2 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
H2afjQ8R1M2 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms