Protein–RNA interactions for Protein: Q8K3G5

Vrk3, Inactive serine/threonine-protein kinase VRK3, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk3Q8K3G5 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Vrk3Q8K3G5 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Vrk3Q8K3G5 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Vrk3Q8K3G5 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Vrk3Q8K3G5 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Vrk3Q8K3G5 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Vrk3Q8K3G5 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC9.97□□□□□ -0.81
Vrk3Q8K3G5 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Vrk3Q8K3G5 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Vrk3Q8K3G5 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Vrk3Q8K3G5 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Vrk3Q8K3G5 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC9.96□□□□□ -0.81
Vrk3Q8K3G5 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Vrk3Q8K3G5 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Vrk3Q8K3G5 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Vrk3Q8K3G5 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Vrk3Q8K3G5 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC9.96□□□□□ -0.81
Vrk3Q8K3G5 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC9.96□□□□□ -0.81
Vrk3Q8K3G5 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Vrk3Q8K3G5 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Vrk3Q8K3G5 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Vrk3Q8K3G5 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Vrk3Q8K3G5 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Vrk3Q8K3G5 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Vrk3Q8K3G5 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Vrk3Q8K3G5 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Vrk3Q8K3G5 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC9.96□□□□□ -0.82
Vrk3Q8K3G5 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Vrk3Q8K3G5 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Vrk3Q8K3G5 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC9.96□□□□□ -0.82
Vrk3Q8K3G5 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC9.96□□□□□ -0.82
Vrk3Q8K3G5 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Vrk3Q8K3G5 AC122371.3-201ENSMUST00000223402 1061 ntBASIC9.96□□□□□ -0.82
Vrk3Q8K3G5 Gzmn-202ENSMUST00000225535 989 ntBASIC9.96□□□□□ -0.82
Vrk3Q8K3G5 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Vrk3Q8K3G5 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Vrk3Q8K3G5 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Vrk3Q8K3G5 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Vrk3Q8K3G5 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Vrk3Q8K3G5 Gm5859-201ENSMUST00000165401 2324 ntBASIC9.96□□□□□ -0.82
Vrk3Q8K3G5 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Vrk3Q8K3G5 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC9.96□□□□□ -0.82
Vrk3Q8K3G5 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Vrk3Q8K3G5 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Vrk3Q8K3G5 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Vrk3Q8K3G5 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.82
Vrk3Q8K3G5 AC124433.1-202ENSMUST00000224762 1535 ntBASIC9.96□□□□□ -0.82
Vrk3Q8K3G5 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Vrk3Q8K3G5 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Vrk3Q8K3G5 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Vrk3Q8K3G5 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Vrk3Q8K3G5 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC9.96□□□□□ -0.82
Vrk3Q8K3G5 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Vrk3Q8K3G5 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC9.96□□□□□ -0.82
Vrk3Q8K3G5 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC9.96□□□□□ -0.82
Vrk3Q8K3G5 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Vrk3Q8K3G5 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Vrk3Q8K3G5 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Vrk3Q8K3G5 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Vrk3Q8K3G5 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC9.95□□□□□ -0.82
Vrk3Q8K3G5 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Vrk3Q8K3G5 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC9.95□□□□□ -0.82
Vrk3Q8K3G5 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC9.95□□□□□ -0.82
Vrk3Q8K3G5 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
Vrk3Q8K3G5 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Vrk3Q8K3G5 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC9.95□□□□□ -0.82
Vrk3Q8K3G5 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Vrk3Q8K3G5 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Vrk3Q8K3G5 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
Vrk3Q8K3G5 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Vrk3Q8K3G5 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Vrk3Q8K3G5 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Vrk3Q8K3G5 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Vrk3Q8K3G5 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Vrk3Q8K3G5 Gm7118-201ENSMUST00000200167 1003 ntBASIC9.95□□□□□ -0.82
Vrk3Q8K3G5 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Vrk3Q8K3G5 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC9.95□□□□□ -0.82
Vrk3Q8K3G5 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Vrk3Q8K3G5 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC9.95□□□□□ -0.82
Vrk3Q8K3G5 Gm9899-201ENSMUST00000065519 555 ntBASIC9.95□□□□□ -0.82
Vrk3Q8K3G5 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Vrk3Q8K3G5 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Vrk3Q8K3G5 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Vrk3Q8K3G5 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Vrk3Q8K3G5 Gm37849-201ENSMUST00000194722 1881 ntBASIC9.95□□□□□ -0.82
Vrk3Q8K3G5 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Vrk3Q8K3G5 Gm5124-202ENSMUST00000132683 2083 ntBASIC9.95□□□□□ -0.82
Vrk3Q8K3G5 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Vrk3Q8K3G5 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Vrk3Q8K3G5 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Vrk3Q8K3G5 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Vrk3Q8K3G5 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Vrk3Q8K3G5 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Vrk3Q8K3G5 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Vrk3Q8K3G5 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Vrk3Q8K3G5 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC9.95□□□□□ -0.82
Vrk3Q8K3G5 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC9.94□□□□□ -0.82
Vrk3Q8K3G5 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Vrk3Q8K3G5 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Vrk3Q8K3G5 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms