Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Tsen54Q8C2A2 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Tsen54Q8C2A2 Gm17420-201ENSMUST00000164753 153 ntBASIC9.84□□□□□ -0.83
Tsen54Q8C2A2 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Tsen54Q8C2A2 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC9.84□□□□□ -0.83
Tsen54Q8C2A2 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC9.84□□□□□ -0.83
Tsen54Q8C2A2 Gm22121-201ENSMUST00000175148 54 ntBASIC9.84□□□□□ -0.83
Tsen54Q8C2A2 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Tsen54Q8C2A2 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Tsen54Q8C2A2 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC9.84□□□□□ -0.83
Tsen54Q8C2A2 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC9.84□□□□□ -0.83
Tsen54Q8C2A2 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Tsen54Q8C2A2 AC022775.2-201ENSMUST00000227885 646 ntBASIC9.84□□□□□ -0.83
Tsen54Q8C2A2 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC9.84□□□□□ -0.83
Tsen54Q8C2A2 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Tsen54Q8C2A2 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Tsen54Q8C2A2 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC9.84□□□□□ -0.83
Tsen54Q8C2A2 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
Tsen54Q8C2A2 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Tsen54Q8C2A2 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Tsen54Q8C2A2 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Tsen54Q8C2A2 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Tsen54Q8C2A2 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Tsen54Q8C2A2 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Tsen54Q8C2A2 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Tsen54Q8C2A2 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Tsen54Q8C2A2 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Tsen54Q8C2A2 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Tsen54Q8C2A2 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Tsen54Q8C2A2 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Tsen54Q8C2A2 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
Tsen54Q8C2A2 AC107453.4-201ENSMUST00000227068 1817 ntBASIC9.84□□□□□ -0.83
Tsen54Q8C2A2 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Tsen54Q8C2A2 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Tsen54Q8C2A2 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Tsen54Q8C2A2 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Tsen54Q8C2A2 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Tsen54Q8C2A2 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Tsen54Q8C2A2 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.84
Tsen54Q8C2A2 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Gm6992-201ENSMUST00000217973 1607 ntBASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Gm37008-201ENSMUST00000195712 319 ntBASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Gm24136-201ENSMUST00000083374 165 ntBASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Tsen54Q8C2A2 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms