Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trub1Q8C0D0 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Trub1Q8C0D0 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.08□□□□□ -0.48
Trub1Q8C0D0 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trub1Q8C0D0 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.08□□□□□ -0.48
Trub1Q8C0D0 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trub1Q8C0D0 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Trub1Q8C0D0 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trub1Q8C0D0 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trub1Q8C0D0 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.08□□□□□ -0.48
Trub1Q8C0D0 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.08□□□□□ -0.48
Trub1Q8C0D0 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.08□□□□□ -0.48
Trub1Q8C0D0 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trub1Q8C0D0 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.08□□□□□ -0.48
Trub1Q8C0D0 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trub1Q8C0D0 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.08□□□□□ -0.48
Trub1Q8C0D0 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Trub1Q8C0D0 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trub1Q8C0D0 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trub1Q8C0D0 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trub1Q8C0D0 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trub1Q8C0D0 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trub1Q8C0D0 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trub1Q8C0D0 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trub1Q8C0D0 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trub1Q8C0D0 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trub1Q8C0D0 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trub1Q8C0D0 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trub1Q8C0D0 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trub1Q8C0D0 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trub1Q8C0D0 Gm15808-201ENSMUST00000119046 604 ntBASIC12.07□□□□□ -0.48
Trub1Q8C0D0 Gm12196-201ENSMUST00000120954 262 ntBASIC12.07□□□□□ -0.48
Trub1Q8C0D0 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trub1Q8C0D0 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trub1Q8C0D0 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trub1Q8C0D0 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trub1Q8C0D0 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trub1Q8C0D0 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trub1Q8C0D0 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trub1Q8C0D0 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trub1Q8C0D0 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trub1Q8C0D0 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.07□□□□□ -0.48
Trub1Q8C0D0 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trub1Q8C0D0 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trub1Q8C0D0 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Trub1Q8C0D0 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trub1Q8C0D0 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trub1Q8C0D0 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trub1Q8C0D0 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Trub1Q8C0D0 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trub1Q8C0D0 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trub1Q8C0D0 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trub1Q8C0D0 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trub1Q8C0D0 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trub1Q8C0D0 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trub1Q8C0D0 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Gm14017-201ENSMUST00000121934 386 ntBASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Gm25881-201ENSMUST00000157783 103 ntBASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Gm16505-201ENSMUST00000179981 232 ntBASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Gm45113-201ENSMUST00000207518 165 ntBASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Gm18730-201ENSMUST00000218038 343 ntBASIC12.06□□□□□ -0.48
Trub1Q8C0D0 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Gm10254-201ENSMUST00000052888 867 ntBASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trub1Q8C0D0 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trub1Q8C0D0 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms