Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trerf1Q8BXJ2 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Gm5070-201ENSMUST00000177599 862 ntBASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Gm29199-201ENSMUST00000187766 775 ntBASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Gzmn-202ENSMUST00000225535 989 ntBASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trerf1Q8BXJ2 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trerf1Q8BXJ2 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
Trerf1Q8BXJ2 Gm43112-201ENSMUST00000196665 3122 ntBASIC12.46□□□□□ -0.41
Trerf1Q8BXJ2 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trerf1Q8BXJ2 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.46□□□□□ -0.41
Trerf1Q8BXJ2 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trerf1Q8BXJ2 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trerf1Q8BXJ2 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.46□□□□□ -0.41
Trerf1Q8BXJ2 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trerf1Q8BXJ2 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trerf1Q8BXJ2 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trerf1Q8BXJ2 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trerf1Q8BXJ2 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trerf1Q8BXJ2 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trerf1Q8BXJ2 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trerf1Q8BXJ2 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trerf1Q8BXJ2 Gm2383-201ENSMUST00000181461 807 ntBASIC12.46□□□□□ -0.41
Trerf1Q8BXJ2 Gm4034-201ENSMUST00000187674 480 ntBASIC12.46□□□□□ -0.41
Trerf1Q8BXJ2 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.46□□□□□ -0.41
Trerf1Q8BXJ2 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.46□□□□□ -0.41
Trerf1Q8BXJ2 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.46□□□□□ -0.41
Trerf1Q8BXJ2 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trerf1Q8BXJ2 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trerf1Q8BXJ2 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trerf1Q8BXJ2 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trerf1Q8BXJ2 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trerf1Q8BXJ2 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trerf1Q8BXJ2 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Trerf1Q8BXJ2 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trerf1Q8BXJ2 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trerf1Q8BXJ2 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trerf1Q8BXJ2 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trerf1Q8BXJ2 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trerf1Q8BXJ2 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.46□□□□□ -0.42
Trerf1Q8BXJ2 Gm45828-201ENSMUST00000206938 1836 ntBASIC12.46□□□□□ -0.42
Trerf1Q8BXJ2 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trerf1Q8BXJ2 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trerf1Q8BXJ2 Adcy6-205ENSMUST00000228566 3707 ntAPPRIS ALT1 BASIC12.46□□□□□ -0.42
Trerf1Q8BXJ2 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trerf1Q8BXJ2 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.45□□□□□ -0.42
Trerf1Q8BXJ2 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms