Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Nup54Q8BTS4 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nup54Q8BTS4 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nup54Q8BTS4 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nup54Q8BTS4 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nup54Q8BTS4 Gm43174-201ENSMUST00000195914 2445 ntBASIC12□□□□□ -0.49
Nup54Q8BTS4 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nup54Q8BTS4 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Nup54Q8BTS4 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nup54Q8BTS4 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Nup54Q8BTS4 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Nup54Q8BTS4 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nup54Q8BTS4 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nup54Q8BTS4 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nup54Q8BTS4 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Nup54Q8BTS4 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12□□□□□ -0.49
Nup54Q8BTS4 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nup54Q8BTS4 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Nup54Q8BTS4 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nup54Q8BTS4 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12□□□□□ -0.49
Nup54Q8BTS4 Gm22711-201ENSMUST00000116890 133 ntBASIC12□□□□□ -0.49
Nup54Q8BTS4 Gm13408-201ENSMUST00000119822 798 ntBASIC12□□□□□ -0.49
Nup54Q8BTS4 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12□□□□□ -0.49
Nup54Q8BTS4 Gm13935-201ENSMUST00000121859 798 ntBASIC12□□□□□ -0.49
Nup54Q8BTS4 Gm10051-201ENSMUST00000145209 414 ntBASIC12□□□□□ -0.49
Nup54Q8BTS4 Gm24844-201ENSMUST00000158679 127 ntBASIC12□□□□□ -0.49
Nup54Q8BTS4 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12□□□□□ -0.49
Nup54Q8BTS4 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nup54Q8BTS4 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Nup54Q8BTS4 Gm18065-201ENSMUST00000221395 526 ntBASIC12□□□□□ -0.49
Nup54Q8BTS4 Gm6781-201ENSMUST00000038304 1242 ntBASIC12□□□□□ -0.49
Nup54Q8BTS4 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nup54Q8BTS4 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Nup54Q8BTS4 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Nup54Q8BTS4 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Nup54Q8BTS4 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nup54Q8BTS4 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Nup54Q8BTS4 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nup54Q8BTS4 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Nup54Q8BTS4 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nup54Q8BTS4 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nup54Q8BTS4 Gm7841-201ENSMUST00000122108 1629 ntBASIC12□□□□□ -0.49
Nup54Q8BTS4 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Nup54Q8BTS4 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Nup54Q8BTS4 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12□□□□□ -0.49
Nup54Q8BTS4 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Nup54Q8BTS4 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nup54Q8BTS4 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12□□□□□ -0.49
Nup54Q8BTS4 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup54Q8BTS4 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup54Q8BTS4 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup54Q8BTS4 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nup54Q8BTS4 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Nup54Q8BTS4 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Nup54Q8BTS4 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.99□□□□□ -0.49
Nup54Q8BTS4 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup54Q8BTS4 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Nup54Q8BTS4 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup54Q8BTS4 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup54Q8BTS4 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup54Q8BTS4 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nup54Q8BTS4 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup54Q8BTS4 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup54Q8BTS4 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup54Q8BTS4 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup54Q8BTS4 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.99□□□□□ -0.49
Nup54Q8BTS4 n-R5s14-201ENSMUST00000122688 107 ntBASIC11.99□□□□□ -0.49
Nup54Q8BTS4 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC11.99□□□□□ -0.49
Nup54Q8BTS4 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.99□□□□□ -0.49
Nup54Q8BTS4 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nup54Q8BTS4 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.99□□□□□ -0.49
Nup54Q8BTS4 Gm22144-201ENSMUST00000157402 102 ntBASIC11.99□□□□□ -0.49
Nup54Q8BTS4 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.99□□□□□ -0.49
Nup54Q8BTS4 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.99□□□□□ -0.49
Nup54Q8BTS4 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup54Q8BTS4 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.99□□□□□ -0.49
Nup54Q8BTS4 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nup54Q8BTS4 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.99□□□□□ -0.49
Nup54Q8BTS4 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Nup54Q8BTS4 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Nup54Q8BTS4 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup54Q8BTS4 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nup54Q8BTS4 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup54Q8BTS4 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Nup54Q8BTS4 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup54Q8BTS4 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.99□□□□□ -0.49
Nup54Q8BTS4 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nup54Q8BTS4 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Nup54Q8BTS4 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup54Q8BTS4 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup54Q8BTS4 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup54Q8BTS4 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup54Q8BTS4 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup54Q8BTS4 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Nup54Q8BTS4 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup54Q8BTS4 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup54Q8BTS4 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup54Q8BTS4 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup54Q8BTS4 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup54Q8BTS4 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms