Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC13.03□□□□□ -0.32
Rab11fip4Q8BQP8 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Rab11fip4Q8BQP8 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Rab11fip4Q8BQP8 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Rab11fip4Q8BQP8 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rab11fip4Q8BQP8 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab11fip4Q8BQP8 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab11fip4Q8BQP8 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab11fip4Q8BQP8 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab11fip4Q8BQP8 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab11fip4Q8BQP8 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rab11fip4Q8BQP8 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab11fip4Q8BQP8 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC13.03□□□□□ -0.32
Rab11fip4Q8BQP8 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC13.03□□□□□ -0.32
Rab11fip4Q8BQP8 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Rab11fip4Q8BQP8 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Rab11fip4Q8BQP8 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.03□□□□□ -0.32
Rab11fip4Q8BQP8 Gm24514-201ENSMUST00000174961 285 ntBASIC13.03□□□□□ -0.32
Rab11fip4Q8BQP8 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC13.03□□□□□ -0.32
Rab11fip4Q8BQP8 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC13.03□□□□□ -0.32
Rab11fip4Q8BQP8 Gm44711-201ENSMUST00000205414 1264 ntBASIC13.03□□□□□ -0.32
Rab11fip4Q8BQP8 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rab11fip4Q8BQP8 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Rab11fip4Q8BQP8 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab11fip4Q8BQP8 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab11fip4Q8BQP8 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab11fip4Q8BQP8 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab11fip4Q8BQP8 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab11fip4Q8BQP8 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rab11fip4Q8BQP8 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Rab11fip4Q8BQP8 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab11fip4Q8BQP8 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Rab11fip4Q8BQP8 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC13.03□□□□□ -0.32
Rab11fip4Q8BQP8 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab11fip4Q8BQP8 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab11fip4Q8BQP8 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rab11fip4Q8BQP8 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rab11fip4Q8BQP8 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC13.03□□□□□ -0.32
Rab11fip4Q8BQP8 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Rab11fip4Q8BQP8 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC13.02□□□□□ -0.32
Rab11fip4Q8BQP8 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rab11fip4Q8BQP8 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Rab11fip4Q8BQP8 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rab11fip4Q8BQP8 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC13.02□□□□□ -0.32
Rab11fip4Q8BQP8 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rab11fip4Q8BQP8 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Rab11fip4Q8BQP8 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Rab11fip4Q8BQP8 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rab11fip4Q8BQP8 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Rab11fip4Q8BQP8 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab11fip4Q8BQP8 Gm5419-201ENSMUST00000119301 527 ntBASIC13.02□□□□□ -0.33
Rab11fip4Q8BQP8 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab11fip4Q8BQP8 n-R5s14-201ENSMUST00000122688 107 ntBASIC13.02□□□□□ -0.33
Rab11fip4Q8BQP8 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab11fip4Q8BQP8 Gm9550-201ENSMUST00000161130 862 ntBASIC13.02□□□□□ -0.33
Rab11fip4Q8BQP8 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Rab11fip4Q8BQP8 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Rab11fip4Q8BQP8 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rab11fip4Q8BQP8 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Rab11fip4Q8BQP8 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC13.02□□□□□ -0.33
Rab11fip4Q8BQP8 Gm9211-201ENSMUST00000182882 975 ntBASIC13.02□□□□□ -0.33
Rab11fip4Q8BQP8 Gm45118-201ENSMUST00000208928 825 ntBASIC13.02□□□□□ -0.33
Rab11fip4Q8BQP8 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rab11fip4Q8BQP8 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC13.02□□□□□ -0.33
Rab11fip4Q8BQP8 Gm21027-201ENSMUST00000219300 1236 ntBASIC13.02□□□□□ -0.33
Rab11fip4Q8BQP8 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab11fip4Q8BQP8 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab11fip4Q8BQP8 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rab11fip4Q8BQP8 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC13.02□□□□□ -0.33
Rab11fip4Q8BQP8 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rab11fip4Q8BQP8 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab11fip4Q8BQP8 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rab11fip4Q8BQP8 AC159308.2-201ENSMUST00000213592 2325 ntBASIC13.02□□□□□ -0.33
Rab11fip4Q8BQP8 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab11fip4Q8BQP8 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab11fip4Q8BQP8 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab11fip4Q8BQP8 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rab11fip4Q8BQP8 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab11fip4Q8BQP8 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab11fip4Q8BQP8 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab11fip4Q8BQP8 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab11fip4Q8BQP8 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rab11fip4Q8BQP8 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rab11fip4Q8BQP8 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab11fip4Q8BQP8 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Rab11fip4Q8BQP8 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab11fip4Q8BQP8 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC13.01□□□□□ -0.33
Rab11fip4Q8BQP8 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC13.01□□□□□ -0.33
Rab11fip4Q8BQP8 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab11fip4Q8BQP8 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC13.01□□□□□ -0.33
Rab11fip4Q8BQP8 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rab11fip4Q8BQP8 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab11fip4Q8BQP8 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab11fip4Q8BQP8 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab11fip4Q8BQP8 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rab11fip4Q8BQP8 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rab11fip4Q8BQP8 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Rab11fip4Q8BQP8 Gm14058-201ENSMUST00000116082 735 ntBASIC13.01□□□□□ -0.33
Rab11fip4Q8BQP8 Gm6335-201ENSMUST00000118081 1194 ntBASIC13.01□□□□□ -0.33
Rab11fip4Q8BQP8 Gm12501-201ENSMUST00000119163 529 ntBASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms