Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Ush1gQ80T11 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ush1gQ80T11 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.87□□□□□ -0.35
Ush1gQ80T11 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ush1gQ80T11 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ush1gQ80T11 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ush1gQ80T11 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ush1gQ80T11 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ush1gQ80T11 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ush1gQ80T11 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ush1gQ80T11 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ush1gQ80T11 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ush1gQ80T11 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ush1gQ80T11 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ush1gQ80T11 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ush1gQ80T11 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ush1gQ80T11 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ush1gQ80T11 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ush1gQ80T11 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ush1gQ80T11 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ush1gQ80T11 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ush1gQ80T11 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ush1gQ80T11 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ush1gQ80T11 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ush1gQ80T11 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ush1gQ80T11 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ush1gQ80T11 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ush1gQ80T11 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ush1gQ80T11 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.86□□□□□ -0.35
Ush1gQ80T11 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ush1gQ80T11 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Ush1gQ80T11 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ush1gQ80T11 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Ush1gQ80T11 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC12.86□□□□□ -0.35
Ush1gQ80T11 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ush1gQ80T11 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.86□□□□□ -0.35
Ush1gQ80T11 Gm15004-201ENSMUST00000119192 630 ntBASIC12.86□□□□□ -0.35
Ush1gQ80T11 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ush1gQ80T11 Gm16071-201ENSMUST00000119589 793 ntBASIC12.86□□□□□ -0.35
Ush1gQ80T11 Gm12036-201ENSMUST00000120008 530 ntBASIC12.86□□□□□ -0.35
Ush1gQ80T11 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ush1gQ80T11 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ush1gQ80T11 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ush1gQ80T11 Gm4654-201ENSMUST00000183305 982 ntBASIC12.86□□□□□ -0.35
Ush1gQ80T11 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC12.86□□□□□ -0.35
Ush1gQ80T11 Gm17826-201ENSMUST00000189720 798 ntBASIC12.86□□□□□ -0.35
Ush1gQ80T11 Gm5714-201ENSMUST00000197343 566 ntBASIC12.86□□□□□ -0.35
Ush1gQ80T11 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.86□□□□□ -0.35
Ush1gQ80T11 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ush1gQ80T11 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC12.86□□□□□ -0.35
Ush1gQ80T11 AC174797.2-202ENSMUST00000225729 568 ntBASIC12.86□□□□□ -0.35
Ush1gQ80T11 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ush1gQ80T11 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ush1gQ80T11 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ush1gQ80T11 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ush1gQ80T11 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ush1gQ80T11 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ush1gQ80T11 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ush1gQ80T11 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ush1gQ80T11 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.86□□□□□ -0.35
Ush1gQ80T11 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ush1gQ80T11 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.86□□□□□ -0.35
Ush1gQ80T11 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ush1gQ80T11 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ush1gQ80T11 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Ush1gQ80T11 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ush1gQ80T11 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ush1gQ80T11 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ush1gQ80T11 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ush1gQ80T11 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ush1gQ80T11 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Ush1gQ80T11 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ush1gQ80T11 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ush1gQ80T11 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ush1gQ80T11 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ush1gQ80T11 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ush1gQ80T11 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ush1gQ80T11 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ush1gQ80T11 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Ush1gQ80T11 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ush1gQ80T11 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ush1gQ80T11 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ush1gQ80T11 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.85□□□□□ -0.35
Ush1gQ80T11 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.85□□□□□ -0.35
Ush1gQ80T11 Gm12899-201ENSMUST00000120565 551 ntBASIC12.85□□□□□ -0.35
Ush1gQ80T11 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC12.85□□□□□ -0.35
Ush1gQ80T11 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ush1gQ80T11 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.85□□□□□ -0.35
Ush1gQ80T11 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ush1gQ80T11 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC12.85□□□□□ -0.35
Ush1gQ80T11 Gm3551-201ENSMUST00000190750 664 ntBASIC12.85□□□□□ -0.35
Ush1gQ80T11 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Ush1gQ80T11 Gm43852-201ENSMUST00000202098 917 ntBASIC12.85□□□□□ -0.35
Ush1gQ80T11 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC12.85□□□□□ -0.35
Ush1gQ80T11 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.85□□□□□ -0.35
Ush1gQ80T11 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ush1gQ80T11 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC12.85□□□□□ -0.35
Ush1gQ80T11 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.85□□□□□ -0.35
Ush1gQ80T11 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ush1gQ80T11 Paupar-201ENSMUST00000194826 3482 ntBASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms