Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Gm35960-201ENSMUST00000202712 767 ntBASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh8Q7TSK3 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Gm13916-201ENSMUST00000117368 628 ntBASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Gm11956-201ENSMUST00000119525 512 ntBASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Gm4726-201ENSMUST00000135604 736 ntBASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Gm6019-201ENSMUST00000148369 736 ntBASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Gm22144-201ENSMUST00000157402 102 ntBASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Mir7032-201ENSMUST00000185154 79 ntBASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Gm17931-201ENSMUST00000208132 634 ntBASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 D9Wsu149-201ENSMUST00000214169 594 ntBASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.6□□□□□ -0.55
Pcdh8Q7TSK3 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh8Q7TSK3 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh8Q7TSK3 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.59□□□□□ -0.55
Pcdh8Q7TSK3 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.59□□□□□ -0.55
Pcdh8Q7TSK3 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh8Q7TSK3 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh8Q7TSK3 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.59□□□□□ -0.55
Pcdh8Q7TSK3 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh8Q7TSK3 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh8Q7TSK3 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh8Q7TSK3 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdh8Q7TSK3 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms